Gene Shewmr4_3370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3370 
Symbol 
ID4253936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4017328 
End bp4018824 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content50% 
IMG OID638120008 
Productalkaline phosphatase 
Protein accessionYP_735493 
Protein GI113971700 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1785] Alkaline phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTA AACGGATCGC TGCAGCTATC TCCTGCAGTT TAATGACGGT TGTAGCCCAC 
GCTGCAGTCT TACCCGCAAC CCAAACTGAC AGTCAGTGGT TTAAAGACAG TGCAGCCAAT
GTCGCGACTA AAGCGCAGCT TGAAACCAAG AAAACAGCTA AAAACGTGAT TCTTTTTGTC
GGCGACGGCA TGAGTATCTC AACCTTAACT GCCGCCCGTA TTCTGCAAGG ACAGCAGCAA
ACGGGTAACC AAGGCGGTGA AGAAAACTTC TTAAGTTTCG AGCAGTTTCC CCATACTGCG
TTAGTGAAAA CCTATAACAC TAACCAGCAA ACGCCTGACT CCGCAGGTAC CATGACCGCC
ATGGCGACTG GGGTAAAAAC CAAAGCCGGT ATCATCTCGA TTTCTGACAC CAGTTTACGT
GGTAACTGTT TGTCTTCTAA AGGTAATGAA CTCGTTTCTC TAGTTGATCT TGCCAATGCT
AAAGGCTTAT CGACTGGGAT TGTCACGACC GCCCGTTTAA CTCACGCGAC GCCTGCCGCG
ACTTACGCAA AATCACCAGA GCGTGATTGG GAAGGCGATT TTAACCTGCC TGCCGAAGCC
GTTGCGAACG GCTGTACCGA TATCGCCAGC CAACTGGTAA TGCGCGATGA AGCAAACTCA
CTTAGCGTTG CCTTGGGTGG CGGTCGCAGC TATTTCTTAC CAAAAGAAGT CACAGACGGT
GAGAACAAAG CCGGTAAACG TAAAGACGGC AAAGACCTGA CCAAAGCTTG GATCGAAAAC
TTTAGCAAAG CGGCTTATGT GTGGGACAAA AAAGGCTTCG ATGCTATCGA TGCTGCCAAT
ACCGATCACT TACTCGGCCT CTTTAACCCA TCCCATATGG AATACGAAGC GGACCGTGCC
GATGACGTTG GTGGTGAGCC ATCACTTTCT GAAATGACCG CGAAATCCCT CGAGATTTTA
AAGAAAAACG ATAAAGGCTT CCTGCTGATC GTGGAGTCGG GTCGTATCGA CCATGGCCAC
CATGCGGGCA ACGCTAACCG CGCCTTGACC GACGCAGTTG AGTTATCTAA CGCAGTGAAA
GCCGCGGTAG ATGCAACCAG CAGCGATGAC ACCCTGATCA TGGTCACAGC TGACCACAGC
CATGTATTTA CTATTGCAGG CTACCCAAAA CGCGGTAACC CGATTTTAGG TTTAGTCCAC
GATGTGGATG GTTCGTTAGC CCTCGCTAAC GACGGCAAGC CTTACACCAC GCTGGCCTAC
ACTAACGGCC CTGGCGCTGT GGTTGGCGTT CGTGACGACT TAACCTCAGT CGACACTCAA
GACAAAGACT TCATGCAACA AGCACTTATC CCAATGGAAA GTGAGACTCA CGCCGGTGAA
GACATCAGCT TACACGCAAT GGGCCCAGGT TCGAATCTGG TGCAGGGCGT GATTGAGCAG
AACGTGATCT TCCACATTAT CAACCAAGCC CAGCAGCTTG GCGGCACTAA GTACTAA
 
Protein sequence
MNIKRIAAAI SCSLMTVVAH AAVLPATQTD SQWFKDSAAN VATKAQLETK KTAKNVILFV 
GDGMSISTLT AARILQGQQQ TGNQGGEENF LSFEQFPHTA LVKTYNTNQQ TPDSAGTMTA
MATGVKTKAG IISISDTSLR GNCLSSKGNE LVSLVDLANA KGLSTGIVTT ARLTHATPAA
TYAKSPERDW EGDFNLPAEA VANGCTDIAS QLVMRDEANS LSVALGGGRS YFLPKEVTDG
ENKAGKRKDG KDLTKAWIEN FSKAAYVWDK KGFDAIDAAN TDHLLGLFNP SHMEYEADRA
DDVGGEPSLS EMTAKSLEIL KKNDKGFLLI VESGRIDHGH HAGNANRALT DAVELSNAVK
AAVDATSSDD TLIMVTADHS HVFTIAGYPK RGNPILGLVH DVDGSLALAN DGKPYTTLAY
TNGPGAVVGV RDDLTSVDTQ DKDFMQQALI PMESETHAGE DISLHAMGPG SNLVQGVIEQ
NVIFHIINQA QQLGGTKY