| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3369 |
|---|
| Symbol | |
|---|
| ID | 4253935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 4015645 |
|---|
| End bp | 4017285 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638120007 |
|---|
| Product | alkaline phosphatase |
|---|
| Protein accession | YP_735492 |
|---|
| Protein GI | 113971699 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1785] Alkaline phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAGA AATTACTGGT ACTCGCAATC TCTGCCATGC TGGGTTTAGC CGCATGCGGT
AGCGATGGTG ACAACGGCGC GGCAGGTACG CCGGGTTCGA ATGGTTCTAA CGGTTCCAAT
GGCAGCGACG GTAAAGACTG GACCGCTGTC AACCAATGGT ATGTCGATGC TCAAGCGCGT
GTGACTAAGG CCGATGGCCT GAGCGTGAAC AACGATGTGG GCGCGGCGAA AAACGTGATC
CTGTTTGTTG GCGATGGCAT GGGCGTCTCG ACTATCACTG CGGCGCGTAT TTTAGAAGGC
CAATTAAAGG GCAAGACGGG TGAAGAAAAC TCTTTATCTT TCGAAACGCT GCCTTACGTA
GGTTTATCTA AGACCTATAA CGTCGATGGT CAAACACCAG ACTCTGCGGG CACAATGTCG
GCGATGATGA CTGGGGTGAA AACCGATGTA GGCGTGATTT CACAGGCCGA AGGCGTAGTG
CGTGCTAACT GCGCATCGAC TAAAGATCAA AACTTAGTGA CATCACTGGA ACTGGCCGCC
ATGGCGGGCA TGTCTACTGG TGTGGTCACC ACAGCGCGTT TAACCCACGC AACACCTGCG
GCAACCTATG CCCACGTGCC TGAGCGTGAC TGGGAAGCCG ACTCAAACCT GCCAGCCGAA
GCTGTAACCA ACGGTTGTAA AGATATCGCC GCGCAAATGC TCGACTTTAA CTATGGCAAT
GGCTTAAACG TGATGATGGG CGGTGGTCGC CGCAGCTTTA TTCCAAAAAC CTTAATTGAT
CCAGAAGGTA AAGCGGGCAA GCGTAACGAT GGTCGCGATC TAACTGCCGA ATGGTTAGCT
AAGTACACTA ATGCGGCCTA CGTTCAGGAC AGAGATGGTT TCCTCAATGT GGATGTTGCC
AGCACTGACC ATTTATTGGG TCTGTTCAAC TCATCCCATA TGGAATACGA CTATGACCGC
ACCGAAGCGG GCGTGAAGGG CGAGCCATCA CTTGCTGAGA TGACAGCCAA GTCGATTGAT
ATTCTGAAGA AAAACACCAA AGGCTATGTG CTGATTGTCG AAGCGGGTCG TATCGACCAT
GCGCACCATG CCGGTAACGC TGCTCGTGCC CTGTACGACA CTGTTGCACT ATCTGAAGCA
GTCCGTGTTG CGATGGAAAA AACCTCGGCA AATGACACTC TGTTAATGGT GACGGCTGAC
CACAGCCATG TGTTCACCAT CGCAGGTTAT CCAACCCGTG GTAACCCAAT CCTAGGTCTG
GTGAAGAGTA ACGATGCGAA CGGTATCGCC GAAGTGACTA ACTCAACCGA CGCTAACGGT
TTGCCTTACA CAACAGTAGG TTATGCCAAC GGCATGGGTT ATGCGTCATT AGCGACGGGT
GGCGATGAGC GTTATAACTT CCCAGTGGAT GCTGGTCGTA AGGACTTGAA TTTTGTGGAT
ACCCAAGACG TTGGATTCCA TCAAGAGGCC CTAGTGCCAT TAAGCGATGA AACCCATGCG
GGTGAGGACG TGGCGATTTT TGCCCGCGGC CCAAGCTCGG ATCTGGTTCA AGGTACGGTT
GAACAAAACC ATATCTTCCA CGTGATGAAC CGTGCGGCGA ATTTAGTCGC GAAAGCAGAA
GCTGCAATGG CGGCGAAGTA A
|
|---|
| Protein sequence | MNKKLLVLAI SAMLGLAACG SDGDNGAAGT PGSNGSNGSN GSDGKDWTAV NQWYVDAQAR
VTKADGLSVN NDVGAAKNVI LFVGDGMGVS TITAARILEG QLKGKTGEEN SLSFETLPYV
GLSKTYNVDG QTPDSAGTMS AMMTGVKTDV GVISQAEGVV RANCASTKDQ NLVTSLELAA
MAGMSTGVVT TARLTHATPA ATYAHVPERD WEADSNLPAE AVTNGCKDIA AQMLDFNYGN
GLNVMMGGGR RSFIPKTLID PEGKAGKRND GRDLTAEWLA KYTNAAYVQD RDGFLNVDVA
STDHLLGLFN SSHMEYDYDR TEAGVKGEPS LAEMTAKSID ILKKNTKGYV LIVEAGRIDH
AHHAGNAARA LYDTVALSEA VRVAMEKTSA NDTLLMVTAD HSHVFTIAGY PTRGNPILGL
VKSNDANGIA EVTNSTDANG LPYTTVGYAN GMGYASLATG GDERYNFPVD AGRKDLNFVD
TQDVGFHQEA LVPLSDETHA GEDVAIFARG PSSDLVQGTV EQNHIFHVMN RAANLVAKAE
AAMAAK
|
|---|
| |