| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3366 |
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| Symbol | |
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| ID | 4253932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4013011 |
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| End bp | 4013715 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638120004 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_735489 |
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| Protein GI | 113971696 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTAT CCCTGTTAGT CACCTTAGCC GTTATTCACT GCGTAGCCTT AGTCAGCCCT
GGGCCGGATT TTGCCATTAT GGTGAAGATT GCTACCTCAC AGCCGCGAAA CACCGCAATC
GCCACGGCGG TGGGGATATC GGTAGCGATT TTAGCCCATA CTATTTTGAG TTTAACTGGC
GTTAGCTTAG TGATTAAAAG CTCCCATAGC TTGTATCTGT TAGTGCAATT GCTGGGCGCT
TCTTATTTGG CGTGGATGGG ATTTGGCGCG CTTAAGGCTG CGGTCGCCTT TTTCAGTAAA
CCCAAAACCG TATTGAACGG CGAGGGCGCA GATCCCTCTG GATTTACAAC TACCTCGGAA
AACAGCCTTG ATATGCCTAC GGCGGGCGGG GTAAACGCCT TATCACCTAA ACAGGGGTTT
ATGCGGGGAC TTTATACCAA TTTATTGAAT CCTAAAGCCT TAGTGTTTTT CTTAACCTTA
TTCTCCGCCC TGATCACGCC GAGCGTGACG CCGGTGACTA AGTTCACCGC TGCGCTGATG
TTATTTGTGT TGTCATTGCT CTGGTTTGGC TTTCTGGCAC TGATGCTCTC TAAAGCCAAG
GTGCAGCAAA AGCTGCAACG ACTCACACCT ATCATCGATG GGGTGATTGG GTTGATCTTT
ATGTCGGTGG CGGTAGCGAT AGTGTCTAAT TTGCTGCTGG CCTAA
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| Protein sequence | MDVSLLVTLA VIHCVALVSP GPDFAIMVKI ATSQPRNTAI ATAVGISVAI LAHTILSLTG
VSLVIKSSHS LYLLVQLLGA SYLAWMGFGA LKAAVAFFSK PKTVLNGEGA DPSGFTTTSE
NSLDMPTAGG VNALSPKQGF MRGLYTNLLN PKALVFFLTL FSALITPSVT PVTKFTAALM
LFVLSLLWFG FLALMLSKAK VQQKLQRLTP IIDGVIGLIF MSVAVAIVSN LLLA
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