Gene Shewmr4_3363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3363 
Symbol 
ID4253929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4010641 
End bp4011183 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content49% 
IMG OID638120001 
Productisochorismatase hydrolase 
Protein accessionYP_735486 
Protein GI113971693 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAC CCGAAGAATG TGTACTCGTT ATCGTCGATG TGCAGGGAAA GCTCGCTCAG 
ATCATGGATA ACTCAGCCAA GCTTCATCAG CAGTTGAGTA CACTTATCCA AGGTGCACAG
CTGTTTGAAA TCCCCATCCT CTGGCTCGAA CAATTGCCCG CCAAACTTGG CTCGACCACC
GAAGAGTTAA AAACCTTGCT CGAAAGAACT GGCTCGCCCA TTGCCAAGCA ACATTTTAGC
GGTTGGTATT GTGATGAATT TGCCAATGCA CTCACGAAAT CTCGGCGCAA ACAGGTGTTG
CTTGCGGGGA TAGAAACCCA CGTCTGCGTG TACCAAACTT GCCGCGATCT GCTCGACCAA
CACTACTCTG TGCATCTTGT CGCTGATGCG GTGTCTTCCC GCAGCGTTGA CAATAAACAG
CTGGGCATTC AAATGATGAC CGCCAAGGGA GCCACTCTCA CCAATGTGGA GTCACTGTTA
TTTGAACTGC AACACGAAGC CCAAGGCGAC CGATTTAAGG CGCTGATTAA GTTGATTAAA
TAA
 
Protein sequence
MLKPEECVLV IVDVQGKLAQ IMDNSAKLHQ QLSTLIQGAQ LFEIPILWLE QLPAKLGSTT 
EELKTLLERT GSPIAKQHFS GWYCDEFANA LTKSRRKQVL LAGIETHVCV YQTCRDLLDQ
HYSVHLVADA VSSRSVDNKQ LGIQMMTAKG ATLTNVESLL FELQHEAQGD RFKALIKLIK