Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3363 |
Symbol | |
ID | 4253929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4010641 |
End bp | 4011183 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638120001 |
Product | isochorismatase hydrolase |
Protein accession | YP_735486 |
Protein GI | 113971693 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTAAAAC CCGAAGAATG TGTACTCGTT ATCGTCGATG TGCAGGGAAA GCTCGCTCAG ATCATGGATA ACTCAGCCAA GCTTCATCAG CAGTTGAGTA CACTTATCCA AGGTGCACAG CTGTTTGAAA TCCCCATCCT CTGGCTCGAA CAATTGCCCG CCAAACTTGG CTCGACCACC GAAGAGTTAA AAACCTTGCT CGAAAGAACT GGCTCGCCCA TTGCCAAGCA ACATTTTAGC GGTTGGTATT GTGATGAATT TGCCAATGCA CTCACGAAAT CTCGGCGCAA ACAGGTGTTG CTTGCGGGGA TAGAAACCCA CGTCTGCGTG TACCAAACTT GCCGCGATCT GCTCGACCAA CACTACTCTG TGCATCTTGT CGCTGATGCG GTGTCTTCCC GCAGCGTTGA CAATAAACAG CTGGGCATTC AAATGATGAC CGCCAAGGGA GCCACTCTCA CCAATGTGGA GTCACTGTTA TTTGAACTGC AACACGAAGC CCAAGGCGAC CGATTTAAGG CGCTGATTAA GTTGATTAAA TAA
|
Protein sequence | MLKPEECVLV IVDVQGKLAQ IMDNSAKLHQ QLSTLIQGAQ LFEIPILWLE QLPAKLGSTT EELKTLLERT GSPIAKQHFS GWYCDEFANA LTKSRRKQVL LAGIETHVCV YQTCRDLLDQ HYSVHLVADA VSSRSVDNKQ LGIQMMTAKG ATLTNVESLL FELQHEAQGD RFKALIKLIK
|
| |