Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3343 |
Symbol | |
ID | 4253909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3990526 |
End bp | 3991467 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638119981 |
Product | Dyp-type peroxidase family protein |
Protein accession | YP_735466 |
Protein GI | 113971673 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2837] Predicted iron-dependent peroxidase |
TIGRFAM ID | [TIGR01413] Dyp-type peroxidase family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATTC AAAATATGCC GCGTGAACAG TTGGGTGTGT GTGCAGAGGG AAACTTACAT AGCGTCTATT TGATGTTTAA TGCGAGCGAC AACGATAACG TTGAATCGCA ATTGCGTCCC TGTATTGCCA ACGTTGCGCA GTATATTTAT GAGTTGACGG ATCAATATTC CGACAGCGCA TTCAATGGTT TTGTGGGCAT AGGCGCCAAC TATTGGGACA GCCTCTATCC TGATGCTCGC CCCGAAATGC TCAAACCATT CCCAGCGATG CAAGCGGGTA ACCGTGAGGC ACCTGCGATC GAATACGATC TGTTTGTGCA CATTCGCTGC GACCGCTACG ACATTTTGCA TTTAGTCGCC AACGAAATCA GCCAAATGTT CGAAGACTTA GTCGAGTTAG TCGAAGAGGA ACGCGGCTTT AGATTTATGG ATAGTCGCGA CTTAACGGGC TTTGTCGATG GCACCGAAAA CCCTAAAGGA CGCCATCGTC AAGAGGTCGC CTTAGTCGGG GATGAAGATC CTGAATTTAA AGGCGGCAGC TACATTCACG TGCAAAAGTA CGCCCACAAC TTGAGTAAGT GGCATAGATT ACCGCTTAAA AAGCAAGAAG ATATTATCGG TCGCACCAAA CAAGACAATA TCGAATACGA GTCCGAAGAT AAGCCATTAA CTAGCCATAT CAAGCGGGTA AACCTCAAGG ATGACAACGG CAAGTCGATT GAGATTTTGC GCCAGAGCAT GCCTTACGGC TCGCTCAAGG AGCAGGGGCT GATGTTTATT TCAACCTGCC GTACGCCAGA GCACTTCGAA AAGATGCTCC ACAGCATGGT GTTTGGCGAT GGTGCGGGTA ATCACGACCA TTTGATGCAC TTCACCAGTG CCTTGACGGG CTCTTCTTTC TTCGCCCCAA GCTTAGATTT TTTGATGCAA TTCGATAATT AA
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Protein sequence | MDIQNMPREQ LGVCAEGNLH SVYLMFNASD NDNVESQLRP CIANVAQYIY ELTDQYSDSA FNGFVGIGAN YWDSLYPDAR PEMLKPFPAM QAGNREAPAI EYDLFVHIRC DRYDILHLVA NEISQMFEDL VELVEEERGF RFMDSRDLTG FVDGTENPKG RHRQEVALVG DEDPEFKGGS YIHVQKYAHN LSKWHRLPLK KQEDIIGRTK QDNIEYESED KPLTSHIKRV NLKDDNGKSI EILRQSMPYG SLKEQGLMFI STCRTPEHFE KMLHSMVFGD GAGNHDHLMH FTSALTGSSF FAPSLDFLMQ FDN
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