Gene Shewmr4_3340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3340 
Symbol 
ID4253906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3988100 
End bp3988570 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content48% 
IMG OID638119978 
Productarginine repressor 
Protein accessionYP_735463 
Protein GI113971670 
COG category[K] Transcription 
COG ID[COG1438] Arginine repressor 
TIGRFAM ID[TIGR01529] arginine repressor 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGA CCAAGAATCA GGATGACCTT GTTAGAATTT TTAAGGCGAT TTTAAAAGAG 
GAGCGCTTTG GCTCCCAGAG TGAAATTGTC GCCGCTTTAC AAGCAGAAGG CTTTAGCAAT
ATTAACCAAT CGAAAGTGTC TCGGATGCTG AGCAAGTTCG GTGCAGTGCG CACCCGCAAC
GCTAAGCAGG AGATGGTTTA TTGCTTACCC GCCGAACTCG GCGTGCCTAC CGCAGGCAGC
CCGTTAAAGA ACTTAGTACT CGATGTTGAC CATAACCAAG CCATGATTGT CGTTCGCACC
AGCCCTGGCG CCGCGCAATT AATTGCCCGT TTATTGGATT CCATCGGTAA ACCAGAAGGG
ATTTTGGGGA CCATTGCCGG AGACGACACT ATCTTTATCT GTCCATCCAG CATCCAAGAT
ATCGCCGATA CCTTGGAAAC CATCAAATCT TTATTCAACT ACGCAGAATA A
 
Protein sequence
MQTTKNQDDL VRIFKAILKE ERFGSQSEIV AALQAEGFSN INQSKVSRML SKFGAVRTRN 
AKQEMVYCLP AELGVPTAGS PLKNLVLDVD HNQAMIVVRT SPGAAQLIAR LLDSIGKPEG
ILGTIAGDDT IFICPSSIQD IADTLETIKS LFNYAE