| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3339 |
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| Symbol | |
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| ID | 4253905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3986874 |
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| End bp | 3987809 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638119977 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_735462 |
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| Protein GI | 113971669 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01772] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTG CTGTACTTGG TGCTGCTGGT GGTATCGGCC AGGCTCTTGC CCTACTGTTA
AAAACTCAAC TGCCTGCGGG TTCACAATTG TCTCTATACG ATATCGCACC GGTAACTCCG
GGTGTTGCGG TTGACTTGAG CCACATCCCA ACTGCTGTTG AAATCAAAGG TTTTGCTGGC
GAAGATCCAA CACCTGCACT GGTTGGTGCT GATGTTGTAT TGATCTCTGC TGGTGTTGCA
CGTAAGCCAG GTATGGATCG CTCAGATCTG TTCAATATCA ACGCAGGTAT CGTACGTAAC
CTGATCGAGA AAGTGGCAGT AACTTGCCCT AAAGCGTTAG TGGGTATCAT CACTAACCCA
GTAAACACTA CTGTTGCTAT CGCGGCTGAA GTGTTGAAGA AAGCCGGTGT TTACGACAAG
AACCGTCTGT TCGGTGTGAC GACTCTGGAC GTTATCCGTT CTGAAACCTT TATCGCTGAA
TTAAAAGGCT TAAACGTTGC TGACGTTAAA GTGAACGTGA TCGGCGGCCA CAGTGGCGTG
ACTATTCTGC CATTACTGTC TCAAGTTGAA GGCGTGACTT TCTCTGATGA AGAAGTGGCT
TCTCTGACCA AGCGTATCCA AAACGCGGGT ACTGAAGTGG TTGAAGCTAA AGCCGGTGGC
GGAAGCGCGA CTCTGTCTAT GGGTCAAGCG GCTTGCCGTT TCGGTATGTC TCTGGTTCGT
GGTCTGCAAG GCGAAGCTAA CATCGTTGAA TGTGCCTATG TTGACGGCGG CAGCGAGCAC
GCAGAATTCT TCGCTCAACC AGTGCTGTTA GGCAAAAACG GTATCGAAAA AGTACTGCCT
TACGGTGAAG TGAGCGCATT CGAAGCTAAC GCCCGTGATT CTATGTTAGA TACGCTGAAA
GGCGATATCA AACTAGGCGT TGATTTCGTT AAGTAA
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| Protein sequence | MKVAVLGAAG GIGQALALLL KTQLPAGSQL SLYDIAPVTP GVAVDLSHIP TAVEIKGFAG
EDPTPALVGA DVVLISAGVA RKPGMDRSDL FNINAGIVRN LIEKVAVTCP KALVGIITNP
VNTTVAIAAE VLKKAGVYDK NRLFGVTTLD VIRSETFIAE LKGLNVADVK VNVIGGHSGV
TILPLLSQVE GVTFSDEEVA SLTKRIQNAG TEVVEAKAGG GSATLSMGQA ACRFGMSLVR
GLQGEANIVE CAYVDGGSEH AEFFAQPVLL GKNGIEKVLP YGEVSAFEAN ARDSMLDTLK
GDIKLGVDFV K
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