Gene Shewmr4_3338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3338 
Symbol 
ID4253904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3986405 
End bp3986794 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content51% 
IMG OID638119976 
Productputative thiol-disulphide oxidoreductase DCC 
Protein accessionYP_735461 
Protein GI113971668 
COG category[S] Function unknown 
COG ID[COG3011] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.446452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGC GGATTTTTTA CGACGGTAAT TGCCCTTTAT GTAGCGCCGA AATGCGTCAG 
CTTAAAGCGC GCGATCCCGA TGATCGCATC GAACTTGTGG ATCTTAATGC CGAGCATTTT
GGCGCTCGAT TCGGCTATAT CGATAAAGAG TACGCCAATA CCATTCTTCA TGGTGAAACG
GCGTCGGGTG AGATTTTGCT CGGACTCGAT GTGACTTGTA AGGCTTGGGA ATTAACGGGT
ACGCGCCCTT GGGTGCAGAT GCTACGACTT CCCCTTATCA AACCCGTTGC GGACTGGACG
TATCTTCGCT TCGCCAAGCA CAGATACCGC ATCTCTTACC TATTGACAGG CAAGGCGCGC
TGCGACAATC AATGCCAACT GCCTAAGTAG
 
Protein sequence
MELRIFYDGN CPLCSAEMRQ LKARDPDDRI ELVDLNAEHF GARFGYIDKE YANTILHGET 
ASGEILLGLD VTCKAWELTG TRPWVQMLRL PLIKPVADWT YLRFAKHRYR ISYLLTGKAR
CDNQCQLPK