Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3331 |
Symbol | gcvT |
ID | 4253897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3979170 |
End bp | 3980264 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638119969 |
Product | glycine cleavage system aminomethyltransferase T |
Protein accession | YP_735454 |
Protein GI | 113971661 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.227448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAATA AAACTGTTCT GTTTAACAAG CACTTAGAAT CAAACGCTAA GATGGTCGAC TTCCACGGTT GGGATATGCC CCTCAACTAT GGTTCACAAA TCGAAGAACA CCACGCCGTG CGTCAAGACG CAGGTATGTT CGACGTGTCC CACATGACTG TGGTTGATGT GACCGGAACC GACGCTTGTG CATTCCTCCG TAAGTTGCTG GCAAACGATG TGGCCAAACT TAAAGTTCCT GGTAAAGCCT TATACGGCGG CATGTTAGAT GACAATGCCG GCATCATCGA CGACCTGATC ACTTACTACC TGACCGACAC TTTCTACCGT GTTGTCGTCA ACAGCGCGAC CCGCGAAAAA GACTTAGCGT GGATCGCCAA ACAATCCCAA GGTTTTGATG TCACAGTGAC TGAGCGTCCT GAGCTGGCGA TGATCGCCGT TCAAGGTCCT AACGCTAAGG CTAAAGCCGC CGCCGTATTC AGTAGCGATC AAAATGCCGC CATCGAAGGC ATGAAACCTT TCTTCGGTAA GCAAGCAGGC TCTCTGTTTA TTGCGACCAC TGGTTACACA GGTGAAGTGG GCTACGAGAT CATCGTGCCA GAAACTGAAG CCGAAGCCCT GTGGCAAGCT CTGTTAGATC AAGGCGTTAA ACCATGTGGT TTAGGCGCTC GCGATACATT ACGTCTCGAA GCCGGTATGA ACCTCTACGG CTTAGATATG GACGAAACCA TCAACCCACT GGCCGCCAAC ATGGGCTGGA CCATCGCATG GGAGCCAACT GACCGTGACT TTATCGGTCG TAAGGCGCTT GAAGCCCTGC GCGATGCGGG TACCGACAAA TTAGTCGGTC TGGTGATGGA AGAAAAAGGC GTGTTACGCC ATGATATGCC AGTATTTTTC ACCGATGCAG CGGGTGTTGA GCAGCAAGGT GTGATTACCA GCGGTACTTT CTCGCCAACA TTGGGCTATT CTATTGCGAT GGCGCGTGTT CCTAACTCGA TTGGGGATAC GGCGGAAGTC GAAATGCGTA AAAAGCGCGT GGCTGTTAGA GTAGTAGCGC CAAACTTTGT GCGCAACGGT AAACAAGCAT TTTAA
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Protein sequence | MANKTVLFNK HLESNAKMVD FHGWDMPLNY GSQIEEHHAV RQDAGMFDVS HMTVVDVTGT DACAFLRKLL ANDVAKLKVP GKALYGGMLD DNAGIIDDLI TYYLTDTFYR VVVNSATREK DLAWIAKQSQ GFDVTVTERP ELAMIAVQGP NAKAKAAAVF SSDQNAAIEG MKPFFGKQAG SLFIATTGYT GEVGYEIIVP ETEAEALWQA LLDQGVKPCG LGARDTLRLE AGMNLYGLDM DETINPLAAN MGWTIAWEPT DRDFIGRKAL EALRDAGTDK LVGLVMEEKG VLRHDMPVFF TDAAGVEQQG VITSGTFSPT LGYSIAMARV PNSIGDTAEV EMRKKRVAVR VVAPNFVRNG KQAF
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