| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3320 |
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| Symbol | |
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| ID | 4253886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3963420 |
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| End bp | 3964328 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638119958 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_735443 |
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| Protein GI | 113971650 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAATG TTGAACAAAT GGCTTTAGTG CTGGACGCGC TACCCGATCC GGCGTTTATT
CTTTCCAAGA GTGGCCGCTA TGTTGCCGTG TTTGGCGGCA AAGATGCGCG TTATTACCAC
GATGGCAGCG GATTAATCGG CCTCTCCCTC GGTGATGTAC TCAACGCTGA AAAGACCGCT
TACTACCTTA ATATCATTGA ACAAGCCTTA GATAGCCGTA AGTTGCTGAT CGAGGAATAT
GAGCTCAGTA ATAAGGATGT CAAAGGCTTA CCCGATAACG GCCCTGCCCA ACCTATCTGG
TTTGAGGGGC GTATTCAGGC GTTAGATTTT CTCGTCGATA ACGAACCCGT CGTCCTCTGG
GTCGCCAGCA ATATTTCCAA ACGCCATAAA CTGGAATTAC AACTGCGGCA ATTAAGCGAT
ACCGACCAAC TGACCGGGCT CTATAACCGC CGTCGTTTAG ACCGTGATTT ACAACTACTC
TTCGACACCT TTAGCCGACA TCACATTCCC GCCTCGATCT TAGTCTTAGA TCTGGACCAC
TTAAAACGGA TCAACGATCA ACTCGGCCAC CAAGCAGGGG ATCGGGTGAT CATAGCCGTC
GCCGAAGCCT GCCAACAACA ATTTAGAAAG ACCGACAGCG CCTACCGTTT TGGTGGCGAT
GAATTTGTGA TTGCCCTGCC TGGGGTTGAG CATGACCAAG CCATAGTGTT TGCCGAATAC
CTCTGTGACT GCTGCTTTAA AGCATTGCAA AAACTGTCAG TAAAGGGGTT GTTTGCCACC
GTCAGCATAG GTGTCGCGAG TATAGAGGCG GGCGATAAAT CCTATGAAGA CACCCTAAAA
CGCGCCGATG CCGCGCTCTA TCAAGCCAAG CGAGATGGTA AGAATCGCGT TATTGCCAAT
AGCGCTTAA
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| Protein sequence | MVNVEQMALV LDALPDPAFI LSKSGRYVAV FGGKDARYYH DGSGLIGLSL GDVLNAEKTA
YYLNIIEQAL DSRKLLIEEY ELSNKDVKGL PDNGPAQPIW FEGRIQALDF LVDNEPVVLW
VASNISKRHK LELQLRQLSD TDQLTGLYNR RRLDRDLQLL FDTFSRHHIP ASILVLDLDH
LKRINDQLGH QAGDRVIIAV AEACQQQFRK TDSAYRFGGD EFVIALPGVE HDQAIVFAEY
LCDCCFKALQ KLSVKGLFAT VSIGVASIEA GDKSYEDTLK RADAALYQAK RDGKNRVIAN
SA
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