| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3318 |
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| Symbol | |
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| ID | 4253884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3960502 |
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| End bp | 3962664 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119956 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_735441 |
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| Protein GI | 113971648 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000715438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCCTA CTTACCTTGC CATCCTGTTA GCAGCCCTAC TACATCCCCC CTTGGCCAGC
GCAGACGAAG TGAACCAACC TGAACTGGAT AAAATCGAGC GCGTGAGTGT TGTCGGCGTA
AGACAACGAT TAGAGCAAGC CGGAACCTTG GCTAACACTA TCATGAAAAC CGAAGTCATC
GACGCCAGCG TGATTGAGAA CAAAAATGCC GTTAACCTCT CCGAGGCGAT TGATAATTCC
CCCGGCGTCA AAGTCTCCAA CGAATGCTCT ATGTGTGGGG TTAAGCGGAT TATGCTCAAC
GGCATGAAAG GTGAGCAAAC CACGATTTTG GTCGATGGTT TACCCGTACA CACCATGATC
TCGGGCTATT ATGCGGTCGA TGCCATTCCA ACAACTGGGG TGGAACGGAT TGAAGTTGCC
CGTGGTGCGG GCGCATCCTT AATTGCCCCC GAAGCCATTG GCGGCACCAT TAATATTGTC
AGCTACGAGC CCACAGAAAA CGGCGCAGAG TTGGATATCT CCGCCGGTGA AAATGGCTAC
CGTAAACTGG GTTTTCTCGG TAAAGGCGTG ACCCAAGATG GCCGCACCCG CGCGACACTC
GTTGCCCAAT ATGATGATAG AGATCAAGCC GATGCGGACA ATAACAAAGT CAACGAAGCA
CCGATGCAGG AAAACCGCAG CCTGACCGCT CGAGTCTCCC ACGATGTGAC CGATACCGAT
AACTTAGTGA TGCGCGTCGC CAATATTCAA TCGGAAATTT TCGGTGGCCC TATGTTAGGC
AGCACCTTTG CCGATGGCGT CGCTTCTAGT ACGGGGAACG TGTTATCCGG CTACGATGGT
CAGTCGAGCG AGCCACAACA GCTGTTTGAA GATGGTGATG TGCGTAAGCG CTACACAGGA
AAAGCCTGGG AAACCACCGA ATGGATTAAA ACCCAGCGTA ACGAGGCCTC ACTCGCTTGG
CTGAGGGAAT TTAACGACAA CTGGAACATG CACCTTACCG CCAGTTACGC CGACCATAAG
CAGGACTCCT TCTATGAAGG CTTCGACTAC ACCGCCGATG ATAAGATGTG GTTCTTCGAC
GCGCGCTTTA ACTATCTTTT GACCGATAGC CAACTACTCA CCTTCGGCGC CGACTTACGC
ACAGAGGAAA TGCGCTCCCA TTCCCGCTCG GGCAGTGCCA ACCCTGACTA TGTTTCCGAC
TCCTTTGACT ATGATGTAAA AGGCGTTTAT CTACAGGACA CTTGGCAAGC CACTGAGTCT
TTAGAAGTTG CAATGGCGCT GCGTTACGAT ACTATCAGCG CCGATTTTAC CGATCCTAAC
AAACCCGGCA CCGAACTCGA TGAGTCGATT CTGTCTCCTA GGGTCGACAT TCGTCTGCGC
CACAATGATG AGTGGACTTC ACGCCTATCC GCAGGTCGCG GCTATCGCGC GCCATTATCC
TTCTTTGAAA CCGACCACGG CATCTTAGAC GGATCACTCG GCTTTGACAT CGATATCGAC
GAGCTAGAAC GCTCCAACTC AGCCAACTAT GCCCTGAGCT ACGAGGGCGA GCGTCTCACC
TCGACCGCCT CGATTGCCTG GACCGAAGTC GAGCATTTAG CGGCATTAAC CACCAACGAC
CATGGTATTC CTTTGCTGAC CCAACTCGAT GAAAAAGCAA GGGTTATTAC CAGCGATATC
GCCCTAGGCT ATCGTTTGAC CGACGATATG AGTCTAAGCC TAACAGCCGA GCATTTTGAT
TATGACTCTG TCTTTAAATC CTCCTATGCC ATTGCACCTG TTGAAAAACG GGTCACGCTC
AGCATGGATT GGGACGTGAA TGACTGGGAA ATCTTTGCCA ACCTAGTATG GATTGGTAGT
CGCGATCTGT CCGACTTTGG CTACGAAGGC TATAACCGCC TCGATGCCAA TGGCCAAGTC
GACCCTAGCT CGAAAAAGAC CACGGATGCC CCCTCTTACG TGACTTTAGA TTTAAAGGTC
AGTTATCAGC TTAACGATAC CCTGTCGCTC TACACTGGGG TCAGCAACCT GTTTGACTAC
ACCCAAGCGG GAGATGAAGA AACACCGCTA TTTTACGATG CGGAAGGCGC CTTCGACGTG
GGCTATATCT ATGGCCCACT GCGAGGCAGA GAGATCTATG CAGGCATGAA GTTTAGCTTC
TAA
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| Protein sequence | MKPTYLAILL AALLHPPLAS ADEVNQPELD KIERVSVVGV RQRLEQAGTL ANTIMKTEVI
DASVIENKNA VNLSEAIDNS PGVKVSNECS MCGVKRIMLN GMKGEQTTIL VDGLPVHTMI
SGYYAVDAIP TTGVERIEVA RGAGASLIAP EAIGGTINIV SYEPTENGAE LDISAGENGY
RKLGFLGKGV TQDGRTRATL VAQYDDRDQA DADNNKVNEA PMQENRSLTA RVSHDVTDTD
NLVMRVANIQ SEIFGGPMLG STFADGVASS TGNVLSGYDG QSSEPQQLFE DGDVRKRYTG
KAWETTEWIK TQRNEASLAW LREFNDNWNM HLTASYADHK QDSFYEGFDY TADDKMWFFD
ARFNYLLTDS QLLTFGADLR TEEMRSHSRS GSANPDYVSD SFDYDVKGVY LQDTWQATES
LEVAMALRYD TISADFTDPN KPGTELDESI LSPRVDIRLR HNDEWTSRLS AGRGYRAPLS
FFETDHGILD GSLGFDIDID ELERSNSANY ALSYEGERLT STASIAWTEV EHLAALTTND
HGIPLLTQLD EKARVITSDI ALGYRLTDDM SLSLTAEHFD YDSVFKSSYA IAPVEKRVTL
SMDWDVNDWE IFANLVWIGS RDLSDFGYEG YNRLDANGQV DPSSKKTTDA PSYVTLDLKV
SYQLNDTLSL YTGVSNLFDY TQAGDEETPL FYDAEGAFDV GYIYGPLRGR EIYAGMKFSF
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