Gene Shewmr4_3311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3311 
Symbol 
ID4253878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3953100 
End bp3953666 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content44% 
IMG OID638119950 
Producthypoxanthine-guanine phosphoribosyltransferase 
Protein accessionYP_735435 
Protein GI113971642 
COG category[R] General function prediction only 
COG ID[COG2236] Predicted phosphoribosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAA AATATTTCGT TACCGCACAA CAACTGCTCG AAGATTCATT TCTATTAGCT 
TCACAGGTTT ATGAGAGTGG ATTCCGTCCG CAGTTTATCG TGGGTATTTG GCGTGGCGGT
GCTCCAATCG GGATCGCGGT ACAAGAGTTT TTCGACTTTA AGAAGGTTGA AACCGACCAT
ATCGCCGTGC GTACCTCGTC TTACTACGGT ATTGGTACCG ACAAGCAAAG CAAAGAAATC
AAAGTCCATG GTCTGCATTA CATTGTTGAA AATGCGAATG CTAGCGACAG CTTACTGATT
GTGGACGATG TGTTTGACTC TGGCCGCAGT ATCCACGCGT TGAAGGAAAA GTTAAGTCAA
CTGATGCGCT TAAACATGCC GCAGGATATT CGTATCGCTT GCCCTTATTA CAAGCCAAAG
AATACCGCTG TGCCTTTAAA GCCTGATTAC TATATCCATG CTTCTGAGGA CTGGTTAGTG
TTCCCACACG AAGTGACAGG GTTAACGCCG GAAGAAATTG CCGAAGGTAA GGGCGATTTA
AAAAATATTC AGCATCTTTT TAAGTAA
 
Protein sequence
MSEKYFVTAQ QLLEDSFLLA SQVYESGFRP QFIVGIWRGG APIGIAVQEF FDFKKVETDH 
IAVRTSSYYG IGTDKQSKEI KVHGLHYIVE NANASDSLLI VDDVFDSGRS IHALKEKLSQ
LMRLNMPQDI RIACPYYKPK NTAVPLKPDY YIHASEDWLV FPHEVTGLTP EEIAEGKGDL
KNIQHLFK