| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3304 |
|---|
| Symbol | |
|---|
| ID | 4253871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 3945399 |
|---|
| End bp | 3946835 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638119943 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_735428 |
|---|
| Protein GI | 113971635 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTCTT ATCCTATATC ACGCCCCTTG GCATTGGTGG CCGCCTTAGT GGCGTTGCAA
TTAACCGCCT GTAGCCAACC TAAACCCGTA GCCGTAGTCG AAAATGAAAA GGAATCCTTG
CTGCAATTTG ATAACGGTAA GCTTATCCAG TTTCAGGAAA AGGCTAATCC GAATTATCGC
CATATTCCCT GCGATTTACC CGCAGTTGAG ACTGTGGTGA CCAACAGTAC AGCCTTTGCC
GCATTAACTC AGTCGGGTGA AGTGATCACT TGGGGTGACA GTTTTGCTGG TGGCGATAGC
CGTGAGGTGA CAGAACAACT TAAGCAAGTG ACGCAAATTG TCCCCGTTAA AGATGGGTTT
GCCGCGCTGC GTAAAGATGG CTCTGTGGTC TATTGGGGCA ATGCGGGAAA ATTAAATCTG
GACAAGGCAT TGCAAGCGCG CATGACCAAT ATCACTAAGT TATTCGCCAA CCGAGAGGCC
CTAGCCGCGC TCGACGCCAA TGGTAAGGTG CATACTTGGG GCTACGGGCC TTACGGCGGC
AATAGTTTGC AGGTGCAGGA TGAGTTAGTC GATGTGGTCG ATATCTTTGC TAAAGGGCGC
AGTTTTATTG CCCTGAAAAA AGACGCCAGC GCCGTAGTGT GGGGTGAGGT TGAAAGTTCG
ACCAATATGA AGAAGTTGCA GTCGCAGCTG ACGGATATTA AACATATCGA ATATTTTCAA
AATACCTATG CCGCTTTGAA AAAAGATGGC TCAGTGGTGA GTTGGGGTTG GCGCAGTGAT
GCTTATCCGA TCCGCAGCGC TCTTAAGGAT GTGGCGAGTC TCACGGCAAA CAGTTGCGCG
TTTGCGGTGT TAAGTCCGAC GGGGGATGCC CATTTCTGGG GCGATGGCAT TAACTGTGGC
GTCGATTGGA TCAAGAAAAC CGATATCACA GGCGTGAAAG AGATTATCAG TGTCGGCCCG
GGATTCTTGC TACTGCGTGA CAACGCTGCG CCGCAAATTC TCGCTGACGA TACGGATTAC
GCCTATCTGT TTGGCTTTCA TCATGCTCAA GCGATCCTCG ACAAGTATTG GCAGCAAGGC
AGCAAAATTA CCCTAGGCAA GTCCTCCTTT GCCTTTACGC GCCCCGATGG CAAAGTGGTG
CCTGTCGGTT ATCGGGCAAA CCTTAAAAAT GTCGAGCAAC TGATTGAACG CATTCCACGC
CTCACTTGGT TAGCGCCGGC AAATGATGGT TTTGTGGGGA TCAGTGAAAA AGGAGAATGG
GTCTCTTGGT CGATGAATCT CGGAATGTTT GATAAACCGC CGGTACAACC TGCCGATTCC
TTGGTGATTA AGCCACTGGA ATTTACCCCC GCTGCCCAAT GTGAGACCCC AGAGCAACGG
CAGGCGATTT TGAGTCAGGC AAGGCCGCAA CGTAAAATCA ATTGGTCATT TGACTAA
|
|---|
| Protein sequence | MQSYPISRPL ALVAALVALQ LTACSQPKPV AVVENEKESL LQFDNGKLIQ FQEKANPNYR
HIPCDLPAVE TVVTNSTAFA ALTQSGEVIT WGDSFAGGDS REVTEQLKQV TQIVPVKDGF
AALRKDGSVV YWGNAGKLNL DKALQARMTN ITKLFANREA LAALDANGKV HTWGYGPYGG
NSLQVQDELV DVVDIFAKGR SFIALKKDAS AVVWGEVESS TNMKKLQSQL TDIKHIEYFQ
NTYAALKKDG SVVSWGWRSD AYPIRSALKD VASLTANSCA FAVLSPTGDA HFWGDGINCG
VDWIKKTDIT GVKEIISVGP GFLLLRDNAA PQILADDTDY AYLFGFHHAQ AILDKYWQQG
SKITLGKSSF AFTRPDGKVV PVGYRANLKN VEQLIERIPR LTWLAPANDG FVGISEKGEW
VSWSMNLGMF DKPPVQPADS LVIKPLEFTP AAQCETPEQR QAILSQARPQ RKINWSFD
|
|---|
| |