| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3300 |
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| Symbol | |
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| ID | 4253867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3940086 |
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| End bp | 3940991 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638119939 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_735424 |
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| Protein GI | 113971631 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.403823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAC TAAGACATCT GCGAACCTTA ATGGCACTGA AGGAAAGTGG CAGCTTGGCG
GGCGCAGCCA AAAAACGTTT TGTCACTCAA TCGGCTCTCT CCCATCAAAT TAAGGAGTTA
GAGCAACGAA TTAATTCGCC CATTTTTGTG CGTAAAAGCA AACCCCTCTC CTTTACTCAA
GAAGGCGCAC GGCTACTGCA CCTCGCCGAA GAGATCCTGC CTAAGGTGTT AGAAACGGAA
ACGGATCTGA AAAATGGCCT AGAGACAGAG ACCAATCAGC TCAGAGTGGG GATTGAATGC
CACAGCTGTT TTCGCTGGTT AATGCCAGTG ATGGAGCAAT TTAGGCAAGA TCATCCGCAG
GCCGAGTTAG ATCTATCGAG CCGTCATCTA TTCGATTCGC TCAATGCCTT AGAGATGGGC
GAACTCGATA TAGTACTGAC CTCAGATCCC GTACCGGGAC ACTCGCTCGC CTATCAGCAT
TTGTTTGATT TTGAAGTGAA GTTAGTGGTT GCCAAGGATC ATCCCTTAGC GAAAGAAGCC
TATGTTACGC CTAAGCAATT GGCCCGCTTA CCCATTATCA GCTACCCAGT GCCACTGGCG
CGTTTAGATA TTTATCGCCA CTTTTTAGAA CCCGCAGGCG TTGAAGCCGG CGAGCAAAAG
ACCTGCGATT TGACCATGAT GTTACTTCAA CGCATCGCCT GTAAGGACGG TATCGCCGCC
CTGCCCAACT GGTCAATCAA TGAGGGACAT GGTTTGAGTT TAGCTTCAGT CAAACTCGGC
CAAGAAGGCT TAAAGCGACC ACTATTTGGG GCCTATCGCC GCCACAGCGC GAACTCGGCC
TTAGTGCAAA ACTGGCTGCA ACTGGTGGCA AGCGAAGGCT TAGCGCGTCA GCAAAAATCC
AATTAG
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| Protein sequence | MIELRHLRTL MALKESGSLA GAAKKRFVTQ SALSHQIKEL EQRINSPIFV RKSKPLSFTQ
EGARLLHLAE EILPKVLETE TDLKNGLETE TNQLRVGIEC HSCFRWLMPV MEQFRQDHPQ
AELDLSSRHL FDSLNALEMG ELDIVLTSDP VPGHSLAYQH LFDFEVKLVV AKDHPLAKEA
YVTPKQLARL PIISYPVPLA RLDIYRHFLE PAGVEAGEQK TCDLTMMLLQ RIACKDGIAA
LPNWSINEGH GLSLASVKLG QEGLKRPLFG AYRRHSANSA LVQNWLQLVA SEGLARQQKS
N
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