Gene Shewmr4_3297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3297 
Symbol 
ID4253864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3935875 
End bp3936738 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content43% 
IMG OID638119936 
Producthypothetical protein 
Protein accessionYP_735421 
Protein GI113971628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATT TTAAGAACAT AGGCTTCGGT GGTTTATTCT TACTCTCACT CGGAGCTCAA 
GCAGCTTCAA CCACACACTT AAATGATCTT ATCGATATGA GAGCAAGCAG TGGTGAGCAT
CAGCTAGAAG AGCGAGGCTA TACCTATAAA AACACGGTAA AAATCTCGAG CAGCTCTATT
ACTTATTGGT GGAGTGCAGA CAGGGAACAG TGTATTGCAG TCACCACAAA GGAGGGACGT
TATAGTGCCA TTATGAATCA ACCGTCAGAG GTATGTGGTC ATTCATCATC TAATAACCAC
AGTCGTGATA ATAAGCACGA TCACGATAAT AGACATGAAC AGGATAGGCA TGAGCACAAT
AGACACTCAA ATAGCTTGGA TAGCATTGTT GGCCTGCGTG CTAGTTCGGG AGAGAGTGAA
CTCCAAGACC TAGGCTATTT CCACCGCAGC ACCAAAACGC TTAATCACAG TAAAGTCAGC
TATTGGTGGA ATCCAAATAA GCAAAACTGT ATTGCTGTCA CCACCAAGGA TGGAAAATAC
GCCTCCTATG CGAATCACCA AAACAATAAG TTTTGTGATG ACGAGAATAC TGATGAAGCA
AGACATCACA GTGTTCGCCA CCATGCAAAC AACAATAGTA ACAACTCAAA TGATATTCAA
AATCTTGTGG GAGGAAGGGC TAGCGGAGGT GAAAGAGTAC TGGAAAGCCA TGGCTATGAG
TTCATCAAGT CTCAAAAAGG TCCAGATCGT ATCTGGGGCT TCTGGTGGAA TAAGTCACAG
CATAAGTGTC TCACGGTAGT CACTTTTGAT GGTAAATACG AAACAATCAC GGATTCCCCC
GCTTTCGATT GTGGTCGTAA ATAA
 
Protein sequence
MKHFKNIGFG GLFLLSLGAQ AASTTHLNDL IDMRASSGEH QLEERGYTYK NTVKISSSSI 
TYWWSADREQ CIAVTTKEGR YSAIMNQPSE VCGHSSSNNH SRDNKHDHDN RHEQDRHEHN
RHSNSLDSIV GLRASSGESE LQDLGYFHRS TKTLNHSKVS YWWNPNKQNC IAVTTKDGKY
ASYANHQNNK FCDDENTDEA RHHSVRHHAN NNSNNSNDIQ NLVGGRASGG ERVLESHGYE
FIKSQKGPDR IWGFWWNKSQ HKCLTVVTFD GKYETITDSP AFDCGRK