| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3296 |
|---|
| Symbol | |
|---|
| ID | 4253863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 3935027 |
|---|
| End bp | 3935548 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638119935 |
|---|
| Product | methylation site containing protein |
|---|
| Protein accession | YP_735420 |
|---|
| Protein GI | 113971627 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAC AAACTGGATT TACCCTGATA GAGTTGGTCG TTGTGATCAT TATTCTTGGG
ATCTTAGCTG TTACGGCTGC ACCAAAGTTT ATAAATCTAC AATCCGATGC GAGGGAATCG
ACACTTCAAG GGATGAAGGG AGCATTGCAA GGAGCAAATT CATTAGTGTA TTCAAAAGCA
GTAATAGCGG GGCTCGAAAA GGCTAAAGCC CAGATCGTGA CATTGGAGCC TGGGGTTATT
GTCATCGCCG ATTATGGTTA CATGACGAGC AATACTTCTG TTGGAATTGT TGCAGAAGAC
TTAAAGGACA TATTAGATGT GAGCTTGCAG GAGTTAAGTG ATGATACCAC TTCAGTGTCC
TCTGAAGATT GGGGGATCCG CATTATTAAC GGGACGAGTT TTAAACTGGT TCCAAAGGGA
AAAACTGCAG ATAGCACGGC ATCTAATGCT TGTTATTTAG TCTATGAGGC TGCAACTGCA
ACCACTTTAC CTCAGTATTC GACAGTGGAT AGCGGTTGTT AA
|
|---|
| Protein sequence | MQKQTGFTLI ELVVVIIILG ILAVTAAPKF INLQSDARES TLQGMKGALQ GANSLVYSKA
VIAGLEKAKA QIVTLEPGVI VIADYGYMTS NTSVGIVAED LKDILDVSLQ ELSDDTTSVS
SEDWGIRIIN GTSFKLVPKG KTADSTASNA CYLVYEAATA TTLPQYSTVD SGC
|
|---|
| |