| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3291 |
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| Symbol | |
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| ID | 4253858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3931206 |
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| End bp | 3931913 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638119930 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_735415 |
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| Protein GI | 113971622 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGGAT TGAATAAGGT GGTTACCAGC TACAGCGATG CGTTAGCGGG ACTCGAAGAT
GGGATGACGG TGATTGCGGG CGGCTTTGGC CTTTGCGGTA TTCCTGAAAA TCTAATCAAA
GAAATCAAAC ACAAGGGCAC CAAAAACCTG ACCGTCGTCT CCAATAACTG CGGCACTACG
GAATACGGAC TTGGGATCTT ATTGCTCGAT AAACAGATCA AAAAAATGAT CGCCTCCTAT
GTGGGCGAAA ATGCCAACTT TGAAGCGCAG ATGATGTCTG GCGAACTGGA AGTCGAACTC
ACGCCGCAGG GTACGCTAGC GGAAAAAATG CGTGCGGCGG GCGCGGGCAT TCCAGCTTTT
TATACCGCAA CCGGCTATGG CACTGACGTA GCAATCGGTA AAGAAGTCAA AGAATTCAAT
GGTCGCCATT ACATTCTTGA AGAATCTATT ACAGGCGACT TTGCCATAGT CAAAGCCTGG
AAGGCCGACA CCTTCGGCAA TTTAGTCTTT CGCAAAACTG CCCGTAACTT CAATCCCCTT
GCCGCCACCG CGGGCAAGAT AACCGTGGTG GAGGTGGAGG AAATTGTCGA ACCGGGTCAA
TTAGATCCCG ATGAAATCCA TACGCCCGGC ATCTATGTCG ATAGGCTTAT CCAAGGCAGC
TTCGAGAAAC GTATCGAGCA ACTGACTACC CGCCCCTCCA GCAAATAG
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| Protein sequence | MSGLNKVVTS YSDALAGLED GMTVIAGGFG LCGIPENLIK EIKHKGTKNL TVVSNNCGTT
EYGLGILLLD KQIKKMIASY VGENANFEAQ MMSGELEVEL TPQGTLAEKM RAAGAGIPAF
YTATGYGTDV AIGKEVKEFN GRHYILEESI TGDFAIVKAW KADTFGNLVF RKTARNFNPL
AATAGKITVV EVEEIVEPGQ LDPDEIHTPG IYVDRLIQGS FEKRIEQLTT RPSSK
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