| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3290 |
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| Symbol | |
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| ID | 4253857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3930187 |
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| End bp | 3931065 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638119929 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_735414 |
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| Protein GI | 113971621 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCCG CCATCCCTGT GTTCAAGGCA TGGATAAAGG GCTGTGACTG GATTTTAAAG
CATCGGGAGA CAAGCAATAT GGCGGTTGAA CACTCAGGGT TAAAGGGCAA GGTGGGGCTG
ATCACCGGCT CCACCAGTGG AATTGGTTTA GCGACGGCTC ATGTGCTGGC GGAGCAAGGT
TGTCATCTTA TTCTGCACGG CTTAATGCCC GAAGCTGAGG GGCAACGCTT GGCGGCGGAG
TTTGCCGAGC AATATCACAT TCATACTTTC TTCAGTAACG CCGATCTGCG GGATCCAGAG
AGCATTCATG CCTTTATGGA CGCAGGTGTT AAGGCTCTGG GCAGTATTGA TATTTTGGTG
AATAACGCCG GTATTCAACA CACTGAAAAT GTTGCTCATT TCCCGATTGA TAAATGGAAC
GACATTATCG CCATTAACCT GTCCTCGGCC TTTCATACCA TTCAACAAGC CGTGCCTGCG
ATGGCCGAAA AGCGTTGGGG CCGCATTATC AATATCGCCT CTGTGCATGG TTTAGTGGCC
TCGGTCAATA AGGCGGCCTA TTGTGCGGCT AAACACGGGA TTGTCGGCCT AACCAAAGTC
GTGGCCATCG AGTGCGCCGA GCAGGGGATT ACCGTCAATG CGATTTGCCC TGGCTGGGTG
GATACACCGC TGATCAACAA GCAGATTGAG GCCATCGCCA GCAATAAGGG CTTAAGTTAC
GACGAGGCTA AGTATCAACT CGTCACGGCA AAACAACCCC TGCCAGAGAT GCTCGACCCG
CGTCAGATTG GTGAATTTGT ATTGTTTTTA TGTAGCAGTG CGGCGCGGGG TATTACCGGC
GCATCGCTGG CCATGGACGG TGCCTGGACC GCGCAATAG
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| Protein sequence | MRPAIPVFKA WIKGCDWILK HRETSNMAVE HSGLKGKVGL ITGSTSGIGL ATAHVLAEQG
CHLILHGLMP EAEGQRLAAE FAEQYHIHTF FSNADLRDPE SIHAFMDAGV KALGSIDILV
NNAGIQHTEN VAHFPIDKWN DIIAINLSSA FHTIQQAVPA MAEKRWGRII NIASVHGLVA
SVNKAAYCAA KHGIVGLTKV VAIECAEQGI TVNAICPGWV DTPLINKQIE AIASNKGLSY
DEAKYQLVTA KQPLPEMLDP RQIGEFVLFL CSSAARGITG ASLAMDGAWT AQ
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