| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3289 |
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| Symbol | |
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| ID | 4253856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3927981 |
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| End bp | 3930032 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119928 |
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| Product | PHB depolymerase family esterase |
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| Protein accession | YP_735413 |
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| Protein GI | 113971620 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
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| TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATGGA ATAAATCGTG TCTCGTCGCC CAATTTCTAC TCCTTGTAAT TGGGCTTTTT
TCATCTCTGA CGTACGCCGG AAGTTGGCAA CAGAATGTAG CCATTGGTGG TTTTAACAAA
GTACATATCT ACACTCCAGA TACTGACGCT AAGGTGGGCG ACGGTAAGGC ATTGATGTTA
GTGCTGCATG GCTGCGTGCA ACCCATCAAC AACTATCTCA CTGCCAACCT TGAACAGGCT
GCAGAGGCTC ACGGCATGGT CATTGCCGTA CCCGATGCGA TGAATAAGGC GGGCTACAGC
TGTTGGTCCT ATTGGCAGGG CAGCATTAAT CGTACATCGG GGGATTATAA AAATCTGATT
AACTTGGCCA ATGCCCTGTC GGGTGATGTA AACCGTCATA TCGACCCGAC TCAGGTGTAT
ATTGCAGGAC TCTCCTCGGG CGCGGCGATG GCAATGCAAA CAGCTTGCGT GGCACCCGAT
GTGTTTGCAG GGGTGGCCTC AAGCGCGGGG CCAAGCATAG GGACGAGTTC GAATGGGGCG
ATCTCTACCT GTGAAACCGT ATCGACATCT ACTTTTAAAT CACGCTGTGA ATCCTACGCG
GGTAGCTATA AGAGTTATTT GGGGACTCAG TTAGCCGTGA TTGGCCATGG TAAGGCCGAC
ACTACGGTCA ACACTTGCTA TAACCAGCAG AATGCCGATG GTTTTGCCAC GGTTTATGGC
GTGACTAAGT TAAGCGGAAC CAATGCGTTA TCTGAGGGCG CTGGACATAC GGCATCTGAA
ACCCTGTGGA GCAACAAACG GGTGGCAATG TTGTGGTTCG ATGGCTTAGA CCATTCATGG
TCTGGTGGGG CGGGTGCATC GGGGGATTAT GTGGCCGACG ACAGCATTAA CTTTGCCACC
TATTTAGGAA AATTTTTTGC CGACAATAAC CAAAGGGTAA ACCGTAATGC CTTGCCTACC
CTTGCCAATG TCACAGGTGC AGATAACGCG GGCGTGCTGA CTGTTTCTGG CATGGCTAAT
GATAGCGATG GGTATGTCGC GCAGGTAACT ATGGGCATTT ATTTGCTCGA CGGTGCGGGC
CAAAGCCTGA TCGGCAATGT GAGTACCACA AGCCTTGGTA GCGACGGCAG TTTTCAGCTA
TCTAGCCAGA GCTTAAGTGA TGGTCTGTAC AAGCTGGTGG TACAAGCAAG TGATGATGTG
TCTGCGCTTA GCGCGCCAGT GGAGTTAACC GTACGTGTTG GGCCTGAGCC TGCGAATGCT
GCGCCAGCAC TGAGTAATAT TCAGGTGAGT GTTTCAGGAC AATGCGCATC GGTGACGGGC
TCGGTTGTTG ATGCAAACCA AAATTTAGCC TCGGTGACCG TTGGTTTTAG TTCTGGTCAG
CAAGTCAGCG CGAGCATTAA TGGCACTCAA TATAGCGCTC AAGGCTGTAA TTTACCGGGC
GGTGCGAATC TTGCGACCGT GATTGCGATG GATAGCACGC AACTCTCCAG CCAAGACAGC
ATTAACTTTA CTATCGATGC GGGCGTGACG GGGGATTACA ACACCCATAT TAATCTTGGT
CATATCACTT GGGGTGTAGG CTATTCCGCC TGTTATCTTG CCTTCGGCAC TGGGCAATTT
ACCATGCGCG AATACGCGGT GGGCAGCTCG CAATGTCAGT GGGTTGCCGA TGGCAATACT
AGCTGCGCGG GGCCTCAGCA GGCATGTACT GGTAGCACAG GTGGCACCAC TGAGCCTACA
GATAGCGACA ACGATGGTAT TAGTGACAGC ATAGATAACT GCCCTAATGT CGCTAATGCG
GATCAGGGGG ACAACGATGG TGATGGAATC GGCAATGCCT GTGATACCAC GCCCAATGGC
GATACTTATC AATGTACCCA AGTCACGGCG AGCAACTATG CCCATGTCAC GGCGGGCCGC
GCGACCAGCA GTGGCGGTTA TGCCTACGCT AAGGGTTCGG GTCAATTAAT GGGGCTTTAT
AACACCTTCT ATAGCAGTAC TTTGGCCAAT ACTGCTACCA ATTACTATGT GGTTGGTAGC
TGTCCTAACT AA
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| Protein sequence | MKWNKSCLVA QFLLLVIGLF SSLTYAGSWQ QNVAIGGFNK VHIYTPDTDA KVGDGKALML
VLHGCVQPIN NYLTANLEQA AEAHGMVIAV PDAMNKAGYS CWSYWQGSIN RTSGDYKNLI
NLANALSGDV NRHIDPTQVY IAGLSSGAAM AMQTACVAPD VFAGVASSAG PSIGTSSNGA
ISTCETVSTS TFKSRCESYA GSYKSYLGTQ LAVIGHGKAD TTVNTCYNQQ NADGFATVYG
VTKLSGTNAL SEGAGHTASE TLWSNKRVAM LWFDGLDHSW SGGAGASGDY VADDSINFAT
YLGKFFADNN QRVNRNALPT LANVTGADNA GVLTVSGMAN DSDGYVAQVT MGIYLLDGAG
QSLIGNVSTT SLGSDGSFQL SSQSLSDGLY KLVVQASDDV SALSAPVELT VRVGPEPANA
APALSNIQVS VSGQCASVTG SVVDANQNLA SVTVGFSSGQ QVSASINGTQ YSAQGCNLPG
GANLATVIAM DSTQLSSQDS INFTIDAGVT GDYNTHINLG HITWGVGYSA CYLAFGTGQF
TMREYAVGSS QCQWVADGNT SCAGPQQACT GSTGGTTEPT DSDNDGISDS IDNCPNVANA
DQGDNDGDGI GNACDTTPNG DTYQCTQVTA SNYAHVTAGR ATSSGGYAYA KGSGQLMGLY
NTFYSSTLAN TATNYYVVGS CPN
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