| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3288 |
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| Symbol | |
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| ID | 4253855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3926482 |
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| End bp | 3927594 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119927 |
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| Product | agmatine deiminase |
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| Protein accession | YP_735412 |
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| Protein GI | 113971619 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
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| TIGRFAM ID | [TIGR03380] agmatine deiminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAACG CGAATGTGGA TGCCACGCAG TTAACGACTA AGCCATCACA AGATGGTTTT
TATATGCCCG CCGAATGGGC GGCGCAGCAA GCCGTATGGA TGATTTGGCC ATATCGTCCT
GATAACTGGC GCTCTGCAGG TGCTTATGCT CAAGCGACCT TTGCTAAGGT GGCCGATGCC
ATTGGTGGTG CAACTCCCGT TTATATGGGT GTACCTCAGG CCTTTTTAGC CGAAGCGCAA
AAAGTGATGC CTTCCCACGT GACTCTGGTC GAAATCGACA GCAACGACTG CTGGGCTCGC
GACACTGGAC CTACTGTGGT GGTCAATGCC GAGGGCGAAT GCCGTGGCGT GGATTGGGGC
TTTAATGCTT GGGGTGGTCA CAACGGTGGT CTGTATTTCC CATGGGATAA GGACGAACAA
GTTGCCGCAC AAATGCTCAA GCAACATGGT TTTGCCCGTT ATAGTGCACC GTTGATCCTC
GAAGGTGGCT CTATCCATGT CGATGGTGAA GGCACCTGTA TGACTACGGC CGAATGTTTA
CTGAATGCCA ACCGCAACCC AGACCTGACG AAAGAGCAGA TCGAAGCTTT ACTGCGTGAC
TATTTGAATG TTAAGCAGTT TATCTGGTTG GAAGAGGGTG TTTATATGGA CGAAACCGAC
GGCCATATCG ACAACATGTG CTGTTTCGCC CGCCCAGGTG AAGTGATCCT GCACTGGACT
GACGATGAAA CCGATCCACA ATATCCACGT TCGAAAGCCG CGCTGGATGT GTTGCAAAAC
ACAGTTGATG CCCAAGGTCG CAAGTTAAAA ATTCACCTGC TGCCGCAACC GGGTCCTCTG
TATTGCACCG AAGAAGAATC AAAAGGCGTT ACAGAAGGCA CTGGCGTACC GCGCACTGCG
GGCGAGCGCT TAGCGGGCTC TTATGTGAAC TTTTTAATCA CCAACGACCG CATCGTATTC
CCACTGCTTG ACCCTGCAAC CGACGATATC GCTGCGCAAA AATTGCAGGA CATTTTCCCT
GAGCACAAGA TTGTGGGTGT GCCCGCGCGG GAGATTTTAT TAGGTGGCGG CAATATCCAC
TGTATTACCC AGCAGATCCC TTCTGGCAAG TAA
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| Protein sequence | MTNANVDATQ LTTKPSQDGF YMPAEWAAQQ AVWMIWPYRP DNWRSAGAYA QATFAKVADA
IGGATPVYMG VPQAFLAEAQ KVMPSHVTLV EIDSNDCWAR DTGPTVVVNA EGECRGVDWG
FNAWGGHNGG LYFPWDKDEQ VAAQMLKQHG FARYSAPLIL EGGSIHVDGE GTCMTTAECL
LNANRNPDLT KEQIEALLRD YLNVKQFIWL EEGVYMDETD GHIDNMCCFA RPGEVILHWT
DDETDPQYPR SKAALDVLQN TVDAQGRKLK IHLLPQPGPL YCTEEESKGV TEGTGVPRTA
GERLAGSYVN FLITNDRIVF PLLDPATDDI AAQKLQDIFP EHKIVGVPAR EILLGGGNIH
CITQQIPSGK
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