Gene Shewmr4_3274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3274 
Symbol 
ID4253842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3908298 
End bp3908675 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content48% 
IMG OID638119914 
Producthypothetical protein 
Protein accessionYP_735399 
Protein GI113971606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00959502 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTCAAG TGAAAATGGC AGACATTGAA TGGCCTGCGG TAGTCAAACT CACTCAAAAT 
GACGAACTAC TCTACCTCGC ACATCAGCGG GATTGGTTAG AGCTTGCCTG CCTGTATCAG
CACCAATTTA TCGACACGGA TCTGTTACTC GACAGTCTCG GTAACCAATA TCTGATCCGC
GCCACCCCAA GCACCATTCA TGAAGATCCC ATAGGTGAAC TGCCTAAGCT ACTAAAACAA
GAGCAAAAAT TGCCGCTTAC CGACTTTATC AAATGGGTAC AAAAGCATGC CAATGCCATA
GGCCAGTGTT GCGTCGCCAA GTTAGCCTTC ACCACCTTGG CCCAAGGGAT GGAAATCGTT
CGCAGCTTAG ATGACTAA
 
Protein sequence
MTQVKMADIE WPAVVKLTQN DELLYLAHQR DWLELACLYQ HQFIDTDLLL DSLGNQYLIR 
ATPSTIHEDP IGELPKLLKQ EQKLPLTDFI KWVQKHANAI GQCCVAKLAF TTLAQGMEIV
RSLDD