| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3266 |
|---|
| Symbol | |
|---|
| ID | 4253834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 3898611 |
|---|
| End bp | 3899906 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638119906 |
|---|
| Product | adenylosuccinate synthetase |
|---|
| Protein accession | YP_735391 |
|---|
| Protein GI | 113971598 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0104] Adenylosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00184] adenylosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000110825 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0000153755 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAAA ACGTAGTTGT TCTCGGCACC CAATGGGGTG ACGAAGGAAA AGGTAAGATT
GTCGACCTTC TAACAGAACA GGCAAAATAT GTAGTTCGCT ACCAGGGCGG TCACAACGCG
GGTCACACTC TTGTGATCAA TGGCGATAAG ACCGTACTTC ATCTGATCCC ATCAGGCATC
CTACGCGACA ATGTAAAATG CATTATCGGT AATGGTGTGG TGCTTGCACC TGACGCACTG
ATGAAAGAGA TCAAAATGCT CAAAGAGCGC GGCATTCCGG TTGAGGAACG TCTACTGATC
TCTGAAGCAT GTCCGCTGAT CCTACCATTC CACTGTGCCT TAGACATCGC TCGCGAAAAA
GCGCGCGGTA ACAAAGCTAT TGGTACTACG GGTCGTGGTA TTGGTCCTGC GTATGAAGAT
AAGATTTCCC GTCGCGGTCT GCGTGTTGGC GATCTGTTCA ATGCTGAACT ATTTGCTGAA
AAGCTGAAAG AAGTTATGGC ATATCATAAC TTTATGCTGA CAGAGTACTA CAAAGTTGAC
GCCGTAGATT ACGAGCAAAC ACTGAGCGAC GCGTTAGCCT TAGCTGACTA CCTGAAGAGC
ATGTGTGTTG ACGTAACTGA ACTCTTGGAT AACGCGCGTA AAGCGGGTGA GCCAATTCTG
TTCGAAGGTG CACAAGGTAC ACTGTTAGAC ATTGACCACG GTACTTATCC GTTTGTGACT
TCGTCAAACA CTACCGCAGG TGGTGTGGCG ACAGGCAGCG GCTTTGGTCC ACGTCATTTA
GACTATGTCT TAGGTATTAT GAAGGCATAT ACCACTCGTG TGGGTGCTGG TCCTTTCCCA
ACTGAACTCT TATGTGAAGT GGGCGACCAT TTAGGGACTA AGGGTCATGA GTTTGGTGCG
ACTACCGGTC GTAAGCGTCG TCCTGGTTGG TTAGATGCAG TGGCAATGCG CCGCGCAGTA
CAAATCAACA GCGTAAGCGG CTTCTGCTTA ACTAAGTTAG ACGTACTCGA TGGCCTGAAA
GAAGTGAAGA TCTGTGTGGG TTACCAACAT TCAGATGGCA CTATCTCTAA GGTTACGCCA
TTAGCGGCTG AAGGTTATGA GCAGGTCACG CCTGTTTATG AAACTATGCC AGGTTGGAGC
GAGTCTACTT TCGGTGCGAC CTCTTTAGAG CAGTTACCGC AAGCCGCTAT CAACTACATC
AAGCGTATTG AAGAGTTGTT AGAAACGCCG ATCGACATCA TTTCTACCGG TCCAGACCGT
AATGAGACGA TGATTTTAGT TAGCCCATTT AACTAA
|
|---|
| Protein sequence | MGKNVVVLGT QWGDEGKGKI VDLLTEQAKY VVRYQGGHNA GHTLVINGDK TVLHLIPSGI
LRDNVKCIIG NGVVLAPDAL MKEIKMLKER GIPVEERLLI SEACPLILPF HCALDIAREK
ARGNKAIGTT GRGIGPAYED KISRRGLRVG DLFNAELFAE KLKEVMAYHN FMLTEYYKVD
AVDYEQTLSD ALALADYLKS MCVDVTELLD NARKAGEPIL FEGAQGTLLD IDHGTYPFVT
SSNTTAGGVA TGSGFGPRHL DYVLGIMKAY TTRVGAGPFP TELLCEVGDH LGTKGHEFGA
TTGRKRRPGW LDAVAMRRAV QINSVSGFCL TKLDVLDGLK EVKICVGYQH SDGTISKVTP
LAAEGYEQVT PVYETMPGWS ESTFGATSLE QLPQAAINYI KRIEELLETP IDIISTGPDR
NETMILVSPF N
|
|---|
| |