| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3261 |
|---|
| Symbol | |
|---|
| ID | 4253829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 3892212 |
|---|
| End bp | 3892967 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638119901 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_735386 |
|---|
| Protein GI | 113971593 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3137] Putative salt-induced outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000014751 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0000121737 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTACGAG CAATACTAAA AGTTATCGCC CCTTTAAGTT TTTTTTGCCT ATCTTTTCCG
GCACTTGCGC TTGTACCTCC CGATTATCAG GAACCGCCAA GCGATTTTAC TGCTGAAGTC
GAAGCGGGCT TACAGTTGAA CACGGGTAAT ACCGAGTCGA GCAGTTTTAA TGGTCGCACC
CAGCTGATTT ATGATGCCAA GCAAACGAAG CAAGAAGCCA CGCTAAAAGC GTATTTTGCT
TCAGAGAAAA ACCAAACCAC CTCAGAGAAG TACGAACTCC AACTGCAGAG CAACTATAAA
CTCACTAAGG GCTATATCTT TGGCCGGGGC GATTTTACTT GGGATCAGTT CGGTAGTTAT
ACCCAAATCT CAACCCTATC ATCGGGTTAT GGTTTTAATG CCATCAGCAG CTATAAGACC
AAACTCAGCC TAGAAGTCGG TCCGGGTTAT CGTTACAACC TGCCAGCAGA ATCGGTAACA
GAGCCGGATC CCGCCGCCGA AAAAGATGTG ATCCTACGAA CTGCGGCAAA GTTTTCGCAA
AAATTGCAGG AATACACCAG CATCAATGCG GACCTAACCG CCGAAGTGGG CGAAAATAAC
AATACCCTTA CCCTCGATAT GAACTACAAG AATTTAGTGT TTCAGGATTG GGCATTTAAG
ATTGGCATGA ACATCAAATA CACCGAAGTG GTGCCCGAAG GCAGTAAGCA GACTGACACT
GTCACCACCT TTAACCTGCT CTACACCTTT AGATAA
|
|---|
| Protein sequence | MLRAILKVIA PLSFFCLSFP ALALVPPDYQ EPPSDFTAEV EAGLQLNTGN TESSSFNGRT
QLIYDAKQTK QEATLKAYFA SEKNQTTSEK YELQLQSNYK LTKGYIFGRG DFTWDQFGSY
TQISTLSSGY GFNAISSYKT KLSLEVGPGY RYNLPAESVT EPDPAAEKDV ILRTAAKFSQ
KLQEYTSINA DLTAEVGENN NTLTLDMNYK NLVFQDWAFK IGMNIKYTEV VPEGSKQTDT
VTTFNLLYTF R
|
|---|
| |