| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3253 |
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| Symbol | thiH |
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| ID | 4253821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3886019 |
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| End bp | 3887458 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638119893 |
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| Product | thiamine biosynthesis protein ThiH |
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| Protein accession | YP_735378 |
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| Protein GI | 113971585 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR02351] thiazole biosynthesis protein ThiH |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000173942 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCACAC ACGAGCATCA TTCCATTACC GTCTCTGACT ATAATCCCAA CGTCAGCTTT
ATTGACGATC AGGCGATTTG GCAGGCCATT GAAGACGCCA GTCATCCGAG TCGCGAACAA
ATCCAAGCCA TTCTCCAAAA GGCGCGCCAA TGCGAAGGCT TAAGCATTCG CGAAACCGCT
CTCCTGCTAC AAAATCAAGA TAAAGCCCTG GATGAAGCAC TCTTTGCCGT CGCCCGTGAA
ATAAAAAACA CCATCTACGG CAATCGTATA GTGATGTTTG CGCCGCTCTA TGTGTCCAAC
CATTGTGCCA ACAGTTGTAG TTACTGCGGC TTTAACGCCG ATAACCATGA ACTAAAACGC
AAGACCTTAA AACAGGATGA GATCCGCCAA GAGGTCACCA TCCTCGAAGA AATGGGCCAC
AAACGGATCT TGGCCGTTTA TGGCGAGCAT CCACGCAACA ATGTGCAAGC CATTGTTGAC
AGTATTCAAA CCATGTACAG CGTTAAGCAG GGCAAGGGTG GAGAAATTCG CCGTATCAAT
GTCAACTGCG CGCCAATGAG TGTGGAAGAC TTTAAACAGC TTAAAACGGC GGCGATAGGC
ACTTATCAAT GTTTCCAAGA AACCTATCAT CAAGACACTT ACAGTAAAGT GCACCTAAAA
GGTAAAAAAA CCGACTTTTT ATACCGACTC TACGCCATGC ACAGGGCGAT GGAAGCAGGA
ATCGACGATG TCGGTATCGG TGCGCTCTTT GGCCTGTATG ACCATAGATT TGAGCTGCTC
GCCATGCTCA CCCATGTTCA GCAACTCGAA AAAGACTGTG GCGTTGGCCC ACATACCATC
TCCTTCCCGC GGATTGAACC CGCCCATGGC TCTGCCCTTA GTGAAAAGCC GCCCTATGAG
GTTGATGATG AGTGCTTCAA GCGTATCGTT GCTATCACTC GCCTAGCCGT ACCTTATACC
GGGCTGATTA TGAGCACACG GGAGAGCGCT GCGCTGCGTA AAGAATTGTT AGAGCTCGGT
GTTTCACAGA TCAGTGCGGG CTCACGCACT GCGCCGGGTG GCTATCAAGA CAGCAAACAA
AATCAACACG ATGCCGAACA ATTTAGCCTT GGTGATCATC GCGCTATGGA TGAGATCATC
TATGAATTAG TTACAGATTC GGATGCCATC CCCTCCTTCT GCACGGGCTG TTACCGTAAA
GGGCGCACAG GCGATCACTT TATGGGATTA GCCAAACAGC AGTTTATTGG CAAATTCTGC
CAGCCCAATG CCTTGATCAC CTTTAGGGAA TATCTGAACG ACTACGCCAG CGATAAAACC
CGTGAGGCAG GTAACGCCCT GATAGAGCGA GAGCTCGCCA AAATGAGTCC ATCACGGGAA
CGTAACGTAC GCGTCTGCCT GAAAAAAACC GATGCGGGTG AACGGGATAT CTATCTATAA
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| Protein sequence | MSTHEHHSIT VSDYNPNVSF IDDQAIWQAI EDASHPSREQ IQAILQKARQ CEGLSIRETA
LLLQNQDKAL DEALFAVARE IKNTIYGNRI VMFAPLYVSN HCANSCSYCG FNADNHELKR
KTLKQDEIRQ EVTILEEMGH KRILAVYGEH PRNNVQAIVD SIQTMYSVKQ GKGGEIRRIN
VNCAPMSVED FKQLKTAAIG TYQCFQETYH QDTYSKVHLK GKKTDFLYRL YAMHRAMEAG
IDDVGIGALF GLYDHRFELL AMLTHVQQLE KDCGVGPHTI SFPRIEPAHG SALSEKPPYE
VDDECFKRIV AITRLAVPYT GLIMSTRESA ALRKELLELG VSQISAGSRT APGGYQDSKQ
NQHDAEQFSL GDHRAMDEII YELVTDSDAI PSFCTGCYRK GRTGDHFMGL AKQQFIGKFC
QPNALITFRE YLNDYASDKT REAGNALIER ELAKMSPSRE RNVRVCLKKT DAGERDIYL
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