| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3245 |
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| Symbol | |
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| ID | 4253813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3874770 |
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| End bp | 3876965 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638119885 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_735370 |
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| Protein GI | 113971577 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000124115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000616268 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATTTG CAAAACGTCG TAATGGTCGA GTCACACTCG GTGCTCATGT TTTAGGTTCG
TTAACGATTG GGATGGCGGT TTCGGCCATT CCCGCAATGG CAACGGAAGG GCAAACGCAA
GTCGTTGATA AGAAAGTCGA GCATATTGAA GTGAACGGTG AGTACTTAGG TTACAACAGC
CGTAAAGTGC AATCGGGTAA ATTTACCGAA GACCTGCTCA ATACCGCTAA AACTGTTACC
GTTATCAATC AAGATTTAAT CAAAGATATG GGCGCCCAGA GTTTTACCGA TGCGTTGCGT
GCAACTCCTG GTATTACCTT AGGTACAGGT GAGGGTGGCA ACCCCTACGG TGATAGACCT
TTCATCCGTG GTTACGATGC CCAATCTTCA ACCTTTATCA ATGGTATGCG TAATGTGGGT
TCACAAAGCC GCGAAACCTT TAACATTGAA CAAATTGAAG TCCTGAAAGG CCCAAGCTCT
GTATACAACG GTCGTGGCGC CGTTGGTGGT AGCATCAACA TTGTGACCAA AAAAGCGCAA
TCCGAAGACT TTATTAATGC CGACGTTTCC GTTGGAACGG ATTCCCTTAA ACGCGCCAGT
GTCGATGTTA ACCATGTGAT TGCCGATGAG GCTGCGGTCC GTATTAACAT GATGGCCCAC
GATGCCGACA CCCCAGGTCG CGATGAAGTT ACGGGTAATC GTTGGGGCGT AGCGCCTTCG
GTGACCTTTG GTTTAACCAC GCCAACAAAA GTGACGCTCG AATATTATCA CTTTGAAAAT
CATGACATTC CTGATTATGG TATTCCCTAC GATCAGGCTA CGGGCGAGCC TGCGGATGTC
GACCCTGACA ACTTCTATGG TCTGTTGTCT CGAGATTTTC GCGATACTAT GGATGATACG
GCGTCAGTGT TGATAAGCCA TGATTTTAAT AACGACATGC AGTTCACTTC GACCTCCATC
TATAGCCGTA ACAGCAATTA CTATATTGTG ACCAACCCGG ACGATACCAC GGGCAACGTG
GCTAATGGTT ATGTTTGGCG AAACACTAAG TCGCGCCATT CGGTTACTAA GACACTAGCC
ACTCAATTAC AACTCTCGGG TGAAGCAAAA CTCGCGGGGA TGACTAACCG TTTTGCCGTC
GGTACTGAAC TCAGTAACGA ACGTACTAGT AATTTAAGTT ACACCGTCGA TACGGGTAAT
GGCCGCAACG CGGGTTGTGA TCAGGCGATG CTGGACAACT ACAACTGTAC GCTGCTGGAT
AATCCGAATC CGCACGATCC TTGGGTTGGT ACTATCACCC TCGGCACCGA TGCGACAGTT
ACAGAAACCG ATACTCGCTC GCTTTATGCC TTTAACACCA TTGAGTTAAC CGAAGCGTGG
ATGGTGAACG CCGGGATCCG TTGGGATGAT TACAGCACCA GTGCTGAGAA TTCGACTTCT
CAATTTAGCA ATGATACTGA CTTCTTTAAC TATCAATTAT CGGTACTTTA TAAGCCCGCT
GAAAACGGCA GTATTTATGC CGCGTGGGGC ACTTCTTCTA ACCCTCCTGG TACCTCAAAT
GGTGATGGCG CGGACCGTCT CGGCAGCACC AACGCCGATT TAGAGCCTGA AGATACTGAA
AGCTACGAGT TAGGCACTAA GTGGGACTTC TTTGCCGGAC GTTTATCTTT GAATGGTTCG
GTATTCCAAA TCGAGAAAAA CAACGCTCGG GTCGCGACCT CTGGCGATCG TAATTCGCCG
CAGGAAAACG TGGGTGAGCA AAAGGTGAAA GGTTTCGAAC TTGGCTTCTC CGGTGACTTC
ACTGAGCATT GGCACGGTTT TGGTGGTTAC ACCTATTTGG ATGCGACCTT GGAAAGCAAT
GGTTATAACC AAGCACAAAA TGGTAACCGC TTCCCCAATA CCGCTAAAAA TAGCTTAAGT
TTATTCACGA CTTACGATGT GACTGAGGAT TTTACTGTTG GTACGGGCGC GTACTACATG
GGTAAAGTTT ATGGTAATAC GGCTAACACG CTGTCGATTC CATCCTACTG GCGTTTTGAT
TTGACTTCAT CTTATAAAAT GAGTGAATTC TTGACCTTAC GCCTGAACGT GCAAAATCTA
ACGGATGAGC GTTATTACGA TAAAGCGTAT ACCGCGCACT TTGCCAATAT GGCCGCTGGT
CGCTTAGTGA TGTTAAGTGC GGATATGCAC TTCTAA
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| Protein sequence | MKFAKRRNGR VTLGAHVLGS LTIGMAVSAI PAMATEGQTQ VVDKKVEHIE VNGEYLGYNS
RKVQSGKFTE DLLNTAKTVT VINQDLIKDM GAQSFTDALR ATPGITLGTG EGGNPYGDRP
FIRGYDAQSS TFINGMRNVG SQSRETFNIE QIEVLKGPSS VYNGRGAVGG SINIVTKKAQ
SEDFINADVS VGTDSLKRAS VDVNHVIADE AAVRINMMAH DADTPGRDEV TGNRWGVAPS
VTFGLTTPTK VTLEYYHFEN HDIPDYGIPY DQATGEPADV DPDNFYGLLS RDFRDTMDDT
ASVLISHDFN NDMQFTSTSI YSRNSNYYIV TNPDDTTGNV ANGYVWRNTK SRHSVTKTLA
TQLQLSGEAK LAGMTNRFAV GTELSNERTS NLSYTVDTGN GRNAGCDQAM LDNYNCTLLD
NPNPHDPWVG TITLGTDATV TETDTRSLYA FNTIELTEAW MVNAGIRWDD YSTSAENSTS
QFSNDTDFFN YQLSVLYKPA ENGSIYAAWG TSSNPPGTSN GDGADRLGST NADLEPEDTE
SYELGTKWDF FAGRLSLNGS VFQIEKNNAR VATSGDRNSP QENVGEQKVK GFELGFSGDF
TEHWHGFGGY TYLDATLESN GYNQAQNGNR FPNTAKNSLS LFTTYDVTED FTVGTGAYYM
GKVYGNTANT LSIPSYWRFD LTSSYKMSEF LTLRLNVQNL TDERYYDKAY TAHFANMAAG
RLVMLSADMH F
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