| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3243 |
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| Symbol | |
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| ID | 4253811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3872785 |
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| End bp | 3873792 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638119883 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_735368 |
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| Protein GI | 113971575 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.021676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000290889 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTTGAAAA ATAATCTTAA TGATGGTCTA CAGCTCGACC GCACCTTTTC CATTGCGCCT
ATGTTGGATC TAACAGACCG TCATTACCGT TATTTTGCTC GCTTAATGTC GGCCAATGCC
TTGCTGTATA CCGAGATGGT GACGACGGGG GCGATTTTAC ATGGCCGTGG TGATTATCTT
GCCTATAACC AAGAAGAACA TCCCCTTGCA TTGCAATTGG GGGGCTCGAA TCCTGCTGAA
CTTGCTCGCT GCGCCAAACT TGCCGCCGAG CGCGGTTATG ATGAAGTGAA CCTCAATGTG
GGCTGTCCTT CCGATCGCGT GCAAAACGGT CGCTTTGGTG CCTGTTTGAT GGCCGAGCCT
GAGCTGGTGG CTGAGTGTGT CGATGCCATG AAGCAAGTGG TGGATATTCC AGTGACGGTA
AAAACACGTA TAGGGATTGA CGAGCAGGAT AGCTATGAGT TTCTGACTTA CTTTATTGAT
ACTGTCATGG CTAAAGGCTG TGGTGAGTTT ATTATCCATG CGCGTAAGGC GTGGCTGCAG
GGCTTAAGCC CGAAGGAAAA TCGCGAGATC CCGCCCTTAG ACTACGACCG AGTGTATCAG
CTTAAGCGTG ATTACCCGAT GCTCAATATC AGCATTAACG GTGGCATCAC TAGCCTTGAA
CAGGCTAAAA CCCACTTGCA GTACTTAGAT GGGGTGATGG TAGGACGTGA GGCTTACCAA
AATCCTTATA TTTTAGCGCA GGTTGACCAA CTGCTCTGCG GCTGCGAGAA GGCGGTGATT
AGCCGTGAAG CCGTGATTGA AGCTATGTTG CCCTATATTG AGGCTCACTT GCAGGCGGGC
GGGCGCTTAA ATCATATCAC TCGCCATATG ATCGGCTTAT TCCAAGGCTT ACCGGGTGCC
CGTGCGTGGC GTCGTTATTT GAGCGAAAAC GCCCATAAAA ATGGTGCAGG TATTGAGGTG
GTCAAACAGG CTTACCAAAG TATTCAGAGC GAAATAATTG CTCAATAA
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| Protein sequence | MLKNNLNDGL QLDRTFSIAP MLDLTDRHYR YFARLMSANA LLYTEMVTTG AILHGRGDYL
AYNQEEHPLA LQLGGSNPAE LARCAKLAAE RGYDEVNLNV GCPSDRVQNG RFGACLMAEP
ELVAECVDAM KQVVDIPVTV KTRIGIDEQD SYEFLTYFID TVMAKGCGEF IIHARKAWLQ
GLSPKENREI PPLDYDRVYQ LKRDYPMLNI SINGGITSLE QAKTHLQYLD GVMVGREAYQ
NPYILAQVDQ LLCGCEKAVI SREAVIEAML PYIEAHLQAG GRLNHITRHM IGLFQGLPGA
RAWRRYLSEN AHKNGAGIEV VKQAYQSIQS EIIAQ
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