Gene Shewmr4_3240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3240 
Symbol 
ID4253808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3871062 
End bp3871799 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content46% 
IMG OID638119880 
Productenoyl-CoA hydratase 
Protein accessionYP_735365 
Protein GI113971572 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00596711 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000100182 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTCATA TACAGGTTCG GGATGATCAG GGCGTTCGTA TTATCAGCTT TAATCGCCCA 
GATAAACGCA ATGCACTTGA TCTTAATATG TATAAACAAC TGACAGAATA CCTGATCGAA
GGTGAAGCAG ACAACGACAT TCGTGCCTTT ATGCTCCATG GCGAAGATAA TTGTTTCACC
TCGGGCAATG ATGTTGCTGA CTTTTTGAAA AATAGTGACT TAGGTCCAAA TCATCCCGCG
GTGCGCTTCC TATTTTGCCT GTTGGAACTC AAAAAACCGC TGGTTGCCGC CGTCTCTGGT
GCCGCCGTTG GCATAGGCAC AACGGTACTG CTTCACTGTG ATTTGGTCTA TGCCGACAAC
ACGGCTAAAT TTCAACTGCC CTTCGTGAAT TTGGCCCTAG TGCCCGAGGC TGGCGCAAGC
TTACTCTTAC CCGAATTGGT GGGTTATCAA AAGGCGGCGG AGCTCTTGCT GCTCGGCGAA
AGTTTTGATG CAAATACTGC ACATAGACTG AATATCATTA ACGATGTAAT AGCCCAAGAA
GAGTTACTCG GTTACGCCCT GAGTCAGGCC AAGAAACTGG CGAATCAGCC ACCGCAAGCA
CTGCAAATCA CCCGTCAGTT GATGCGACCA CATAAAAACC GCGTGCAACA CCAGATGCAT
CAAGAATTAG AACAATTTAG TGAAAGACTT AAAAGCGATG AAGCAAAAGC CAAATTTCAG
GCTTTTCTTA AAAAGTGA
 
Protein sequence
MSHIQVRDDQ GVRIISFNRP DKRNALDLNM YKQLTEYLIE GEADNDIRAF MLHGEDNCFT 
SGNDVADFLK NSDLGPNHPA VRFLFCLLEL KKPLVAAVSG AAVGIGTTVL LHCDLVYADN
TAKFQLPFVN LALVPEAGAS LLLPELVGYQ KAAELLLLGE SFDANTAHRL NIINDVIAQE
ELLGYALSQA KKLANQPPQA LQITRQLMRP HKNRVQHQMH QELEQFSERL KSDEAKAKFQ
AFLKK