Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3240 |
Symbol | |
ID | 4253808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3871062 |
End bp | 3871799 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638119880 |
Product | enoyl-CoA hydratase |
Protein accession | YP_735365 |
Protein GI | 113971572 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00596711 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000100182 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGTCATA TACAGGTTCG GGATGATCAG GGCGTTCGTA TTATCAGCTT TAATCGCCCA GATAAACGCA ATGCACTTGA TCTTAATATG TATAAACAAC TGACAGAATA CCTGATCGAA GGTGAAGCAG ACAACGACAT TCGTGCCTTT ATGCTCCATG GCGAAGATAA TTGTTTCACC TCGGGCAATG ATGTTGCTGA CTTTTTGAAA AATAGTGACT TAGGTCCAAA TCATCCCGCG GTGCGCTTCC TATTTTGCCT GTTGGAACTC AAAAAACCGC TGGTTGCCGC CGTCTCTGGT GCCGCCGTTG GCATAGGCAC AACGGTACTG CTTCACTGTG ATTTGGTCTA TGCCGACAAC ACGGCTAAAT TTCAACTGCC CTTCGTGAAT TTGGCCCTAG TGCCCGAGGC TGGCGCAAGC TTACTCTTAC CCGAATTGGT GGGTTATCAA AAGGCGGCGG AGCTCTTGCT GCTCGGCGAA AGTTTTGATG CAAATACTGC ACATAGACTG AATATCATTA ACGATGTAAT AGCCCAAGAA GAGTTACTCG GTTACGCCCT GAGTCAGGCC AAGAAACTGG CGAATCAGCC ACCGCAAGCA CTGCAAATCA CCCGTCAGTT GATGCGACCA CATAAAAACC GCGTGCAACA CCAGATGCAT CAAGAATTAG AACAATTTAG TGAAAGACTT AAAAGCGATG AAGCAAAAGC CAAATTTCAG GCTTTTCTTA AAAAGTGA
|
Protein sequence | MSHIQVRDDQ GVRIISFNRP DKRNALDLNM YKQLTEYLIE GEADNDIRAF MLHGEDNCFT SGNDVADFLK NSDLGPNHPA VRFLFCLLEL KKPLVAAVSG AAVGIGTTVL LHCDLVYADN TAKFQLPFVN LALVPEAGAS LLLPELVGYQ KAAELLLLGE SFDANTAHRL NIINDVIAQE ELLGYALSQA KKLANQPPQA LQITRQLMRP HKNRVQHQMH QELEQFSERL KSDEAKAKFQ AFLKK
|
| |