| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3230 |
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| Symbol | |
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| ID | 4253798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3861517 |
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| End bp | 3862692 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638119870 |
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| Product | L-sorbosone dehydrogenase, putative |
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| Protein accession | YP_735355 |
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| Protein GI | 113971562 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.400562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000328613 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTGTATA TAAAATCTAA TAATTATAAA TATTTAAGGG TGTTCTCTGC CTATTGGACC
CTACTGGCGA GTCTGGCGTT ATTATCGAGT CAGGCTGCGA TAGCTGGGTC TCAGTCGATC
ATGATTACCG TGTCCAAGGG ATTTGGTTTA TCCCTTTATG CCTCCGATCT GGGGGATGCT
AAACAGATTG CCATGGGGGC TAACGGCACA CTATTCGTGG GGTCCAATAA GAGTGGTACA
GTGCATGCGC TCGTTGACAG CAACCAAGAT GGCCGTGTCG ATAAGCGTTA TGTGATTGCT
AAAGGGCTCG AATCTCCCGA CGCGGTAGCC TTCCATAATG GCGATCTTTT TGTTGCAACC
GAAAACCGTA TCGTACGTTT TATTGATATT GAGCAGCGCC TACGCCGTCC GACTCGCCCT
AAAGAGATCT ACAGCGATCT ACCTGAATCT GATAAAAAAA GTGCCCGTGC GATGAATTTT
GGCCCCGATG GTCGCTTGTA TGTCTCTATC GGCGCACCGT GCAACGTGTG TGAGGCGGGG
GCGCCCTATA GCAGCATTAT TGCGATTAAT GTCGACACTG GAGCAAGTGA GCAGATTGCA
CTGGGCGTAC GTGATGCGAC TGGATTTGAC TGGTCTCCCC AAGATGGCAA GTTATGGTTT
GCCGATCAGG GCCGTGATTG GATGGGGGAT AACTTACCAC CCGATGAAAT CAACCGGGTC
GATGTGATTG GCAGTCATTA TGGCTTCCCG TATTTGCATG CCTCGTCCGT GGTAGAGCCT
GCCTACGAAA AGCCTAAAAA TTTAAAAATT ACCGTCCCAG TGTATGAACT GCCAGCCCAT
GTTGCACCTA CGGGCCTCGC GTTTTACCGC GGTAAGCAAT TCCCTGAGAT CTACCATAAC
CAATTGTTTG TTGCTGAAAA TGGTTCTTGG AACCGTTCAA GCAAAGTGGG TTATCAGATC
GTCATGTTGA AACTCGAGAA TGAGCAAGTT GTCAGCCGTG AAACCGTAGT GAGTTTTCTT
GATGGCGAGT TTCCCGTTGC CCGTCCCTAT GCTTTGTTAT CGGGGGAAGA TGGGGCAATG
TACATCTCGG ATGATTTGAA AGGTAACCTG TATCGGCTGT TCTATAGGGA TGGCGATAAT
ACTGAAGAAC CACAGGAACT AGAAGAAAAT GAGTGA
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| Protein sequence | MLYIKSNNYK YLRVFSAYWT LLASLALLSS QAAIAGSQSI MITVSKGFGL SLYASDLGDA
KQIAMGANGT LFVGSNKSGT VHALVDSNQD GRVDKRYVIA KGLESPDAVA FHNGDLFVAT
ENRIVRFIDI EQRLRRPTRP KEIYSDLPES DKKSARAMNF GPDGRLYVSI GAPCNVCEAG
APYSSIIAIN VDTGASEQIA LGVRDATGFD WSPQDGKLWF ADQGRDWMGD NLPPDEINRV
DVIGSHYGFP YLHASSVVEP AYEKPKNLKI TVPVYELPAH VAPTGLAFYR GKQFPEIYHN
QLFVAENGSW NRSSKVGYQI VMLKLENEQV VSRETVVSFL DGEFPVARPY ALLSGEDGAM
YISDDLKGNL YRLFYRDGDN TEEPQELEEN E
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