Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3226 |
Symbol | |
ID | 4253794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3855285 |
End bp | 3856103 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638119866 |
Product | UBA/THIF-type NAD/FAD binding protein |
Protein accession | YP_735351 |
Protein GI | 113971558 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0542286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000000483539 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTGAAG CCTATCAGAA TCGCTTTGGT GGCATTGGCC GCTTGTACGG GCAAAAGGCG CTCGCTAAAT TTGCCGCCTC CCATGTAGTG GTGATTGGCA TTGGCGGCGT GGGCACATGG GCGGCGGAGG CGTTGGCACG CAGTGGTATT GGCCAAATCA CTCTGATTGA TTTGGATGAT ATCTGCGTGA CTAATACTAA CCGTCAAATT CATGCTCTGA CATCGACGAT CGGTGAGTCT AAAGTGGCTG TGATGGCGCA GCGGATCCGC TCGATCAATC CCGATTGCCA AGTCAATGAA GTGGAAGACT TTATTACTGT CGATAACCTT GGTGAGTATT TGCTCGGGTC AAAAGCGGGT GGCAATATCG ATTATGTGGT TGATTGTATT GATGCGGTTA AGCAAAAGGC GGCACTGATT GCTTGGTGTA AACGTCAAAA AATCAAGATA GTGACAGTTG GCGGCGCGGG CGGCCAAACG GATCCTACCC AAATTCAATT AACCGATCTG GCGAAAACTT ATCAAGATCC TTTACTGGCC AAAGTGCGTA ATATTTTGCG CCGTGAATAT AACTTCTCTA AAAATGTGCA GCGCCGTTTT GCTGTTGATG CGGTGTTTTC CAGCGAGCAG TTAGTTTATC CCCAAGCCGA TGGTTCCGTG TGCAGCAGCA AGGCGACGGC CGATGGCTCT ATGCGTATGG ATTGTGCCTC TGGTTTTGGT GCCGTCACTA TGGTGACTGG GACTTTTGGA TTTGTGGCGG CGAGTCGCGT ACTTGCTAGG CTCGCCCAAC TTGCAAATGA ACCAGCCGCA AGTGAATAA
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Protein sequence | MTEAYQNRFG GIGRLYGQKA LAKFAASHVV VIGIGGVGTW AAEALARSGI GQITLIDLDD ICVTNTNRQI HALTSTIGES KVAVMAQRIR SINPDCQVNE VEDFITVDNL GEYLLGSKAG GNIDYVVDCI DAVKQKAALI AWCKRQKIKI VTVGGAGGQT DPTQIQLTDL AKTYQDPLLA KVRNILRREY NFSKNVQRRF AVDAVFSSEQ LVYPQADGSV CSSKATADGS MRMDCASGFG AVTMVTGTFG FVAASRVLAR LAQLANEPAA SE
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