| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3225 |
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| Symbol | |
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| ID | 4253793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3853511 |
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| End bp | 3855142 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638119865 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_735350 |
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| Protein GI | 113971557 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000746218 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGACAT TCTTTAGTCA ATTTATTAAA AGTCCGATAG GCAGGCATCT CACCTTGTCT
ATCGTGCTCT TTAGCTCCTT GATTACCTTA ATGACCACTG CCTACCAATT GGTTAACGAC
TACCGCGGTG ATGTCACTCG AATCGACCGT GTTTTCTCCA ATATTGAAAA AGCCAATCTC
GATGTCCTCG CCGCCAGTAT CTGGGTCATA GATGAGAGAC TAATTAATAC TCAGTTGAAT
GGTCTTATCC AACTGCCTGA TATCAACTAT ATTTCAATCA AAGACGACAG TGGCCAGGCG
TGGAATTCTG GTGCCCAAAA ACAAACCCAT ACACTCAGTA AAACCTTTCC TCTGGTGTAT
AAGTCACCTA CGGATAATAT CAATGTCGGC AGTTTAGAAG TGCAAGTGGA TATGGATGCT
ATCTATCAAC GCCTCTACGA TAAAGCCATC CTTATTCTGC TATCCAATGG TATTAAAACC
TTCCTAGTGG CTGGATTTAT TCTATTTTTG GTCTGGTACA ACATCACTAA ACACTTAGAC
AAACTCAGTA ATTACTGTAA GCGCATCGAT CTCGATAGCG ATGTGGAACC ATTAGACTTC
GATCGCAAAC AAAAACTCGA TGAATTTACC CAAGTAGCCG ATGCCATCAA TAGCATGCAG
GCACAATTAC GCGGCTCATT TGAAGCTCTC AAACGTTCCA AAGCCGAACT GCAAACCTCC
TTAGAAGACA GAGAACGTTT ATTGAAACTT GAGCGCAGCT ATAAGGAAGA ACTTGCACGA
CAAGTCAAAG AAAGAACTCA GGAATTAGAA CAGTCATTAA CAGCGCTAAA ACGAGCGCAG
CAAGTATTAG TCGAGCAGGA AAAAATGGCG GCATTGGGCG GGCTCGTCTC AGGGGTTGCC
CATGAGATCA ATACGCCGAT CGGCATTTGT TTGACGGCGG CTAGCGCGCA ATTGAGTCAT
ATCGAGGAGC TTATAGACCT CATTCACAGC GAACATGCCA CTCTCGACGA GATTAATGCG
ATTTTAGATG AGTACCAAGA AAGCTGTGAG CTGATAGTCC GTAATATCAC CAAGGCCAGT
AGTCTTATCC AAAAATTTAA AACGATCGCC ATCGATCGTA GCCATGAAGA ACATCAATGC
ATCAATTTAA AAAGTCAGCT GCAGGAGATT TTAGAATCTA CTTTAATCAT GTATCCCAAG
TTAAAAGCGC AAACCCAATT AGAGGTTGAG CCAGCGCTCA ACATCCAAAC CAATGTTAGC
CTGCTCAATC AAATCGTCAG CAATATTCTC TCCAACGCCT TCACCCATGC CTTCCAAGAT
AGGGAAAATA ATCAAATTCA GATTTCGGCC AAGTTAGAGC AAGGCTATGT GAATATCAGC
ATCGAAAACA ATGGTATCGC CATTCCGCCT GAAGTGGCAG AACATATGTT TGAGCCCTTC
TTTACCACCA ACAGGAGTAA AGGGGGCACT GGATTAGGCT TATCCGCCGC CTTTAATGCC
GCCACACTGC TAAAGGGCAC CATGAATTAC CAAGCAGACT CAACACTGGG AGGGGCCAAA
TTCAATATCC GTATTCCCCT TACCCAATGC GATGCTCCCA AACTGACCAC ACACCATGAC
TTTACGATTT GA
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| Protein sequence | MLTFFSQFIK SPIGRHLTLS IVLFSSLITL MTTAYQLVND YRGDVTRIDR VFSNIEKANL
DVLAASIWVI DERLINTQLN GLIQLPDINY ISIKDDSGQA WNSGAQKQTH TLSKTFPLVY
KSPTDNINVG SLEVQVDMDA IYQRLYDKAI LILLSNGIKT FLVAGFILFL VWYNITKHLD
KLSNYCKRID LDSDVEPLDF DRKQKLDEFT QVADAINSMQ AQLRGSFEAL KRSKAELQTS
LEDRERLLKL ERSYKEELAR QVKERTQELE QSLTALKRAQ QVLVEQEKMA ALGGLVSGVA
HEINTPIGIC LTAASAQLSH IEELIDLIHS EHATLDEINA ILDEYQESCE LIVRNITKAS
SLIQKFKTIA IDRSHEEHQC INLKSQLQEI LESTLIMYPK LKAQTQLEVE PALNIQTNVS
LLNQIVSNIL SNAFTHAFQD RENNQIQISA KLEQGYVNIS IENNGIAIPP EVAEHMFEPF
FTTNRSKGGT GLGLSAAFNA ATLLKGTMNY QADSTLGGAK FNIRIPLTQC DAPKLTTHHD
FTI
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