| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3223 |
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| Symbol | |
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| ID | 4253791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3850581 |
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| End bp | 3852170 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638119863 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_735348 |
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| Protein GI | 113971555 |
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| COG category | [N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2703] Hemerythrin |
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| TIGRFAM ID | [TIGR02481] hemerythrin-like metal-binding domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000784984 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGACA TCAGTGTCAA CAAAGGCAGC ATGGGATATG GCATTATCTT TGCGCCCATG
ATCCTATTCT TATATCCACT CTACTGTTTA GTGACGAGCG CGTACTGGGT GGCAACATTC
AGTTTAATTG CTCTTGCCGT AATTCTCTTT TTGAATCTTA ACAAACTCAT CCGTAATTTA
AGACACTTAG AGCGTGCGGC TCATCACTTA GGTGAGGGGG ATTTAAGTTA TCAGCTCGAT
GAAAAAGATG CGGGTGTGTT TATTTCGGTG GTCCATAGCA TCAACCGCAT GGGGGAGGAT
GTCAGCCGCA CTATTCTCTC CCTCGTCGAT ACGAGTGAGT GGATGAAGAA AGTCGCGACC
GATATTAAAA CGATCAGCGA ACAGGCAAAA CAGGGCGTGC TCGAGCAGGA ACGTCAAACC
GAGTTGGCCG CAACGGCAAT GACGCAGATG GTCTCCACCG TACAAGAAGT GTCACACAAT
GCTGCTACTA CGGCTCAAGC GGCCGATATT GCCCAAGGCT CGGCGAAACA CGGTGATGAG
TTAATTGGTA CTATCGTAAA TAAAATCAGC GATATGAAAT CGCAAATTCA TCAAACTAAA
GGCGTTATCG AGCACCTCGC CGCCGATACC AATAGCATTA GTAGTATTAT CGAAACCATC
TCCCAAGTGG CTGAACAAAC AAACCTATTG GCACTCAATG CGGCGATTGA GAGTGCGCGC
GCCGGTGAAC ATGGCCGTGG CTTTGCGGTC GTCGCCGATG AAGTGCGTAA CTTAGCTAAA
CGTACCTCAG AGGCCACCGC CGAAATTCAG CAGCAGATTA CAACGCTGCA AAAGGGCGCG
CAGCAGAGTG TGGAAGTGAT GCTCAAGAAT GTCACCATCG CCGACGAAAC TGCCCTGATG
GTTGATCAAG CTCATCAAGC TCTGGGGGAT ATAGTGACTC AGGTTGAGAG CATTACCGAT
ATGTCTCACC AAATCGCAAC GGCCTCGGAA GAACAGCATG CGGTTGCTGA GGAGATTAAC
AAAAATATCA GCGTAATGGC CGATCTCGCC CTAAAAAATG CACGCCATAC CAACCACACT
AACTTATCCA GTCTTAAGGT GTATAACATG TCGCAGGAAA TTGGCTCCCT GCTGCATCGA
TTCCAAGTTG ATGCCAAGAT GTTTAACTCT AACGAAGCCC AGAGCAAGTT ATTCGTAAAA
TGGGGGCCAG AGCTTGATAT CGGCATGCCA GAGATTAACC GTCAGCACCA ACGCTTAGTC
TCATTAATCA ATGAATTACA CCGGACCTTA AGTGAGGCAT ATGGGCTTGA GGCGATTAAG
CGTATCGTCC AAGGGCTGGT GGATTACACC GCGAACCATT TCTCCTATGA AGAAGAACTG
TTTGCACGTT TTGGCTATCC TCAAACCGTG GCCCACAAAG AAAAACATGC TCAACTCGTT
GATCAAGTAC TTGACTTTCA AAAGCGGGTA GGTAGAGGTG AAGATGTAGC CGATGAACTC
ATGGCATTTT TAAAAGCCTG GCTAGTCAAT CATATTCAAA AGAGCGATAA AGAATACACC
CAATTTTTAC TCGCCCATGG CGCCGAATAA
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| Protein sequence | MADISVNKGS MGYGIIFAPM ILFLYPLYCL VTSAYWVATF SLIALAVILF LNLNKLIRNL
RHLERAAHHL GEGDLSYQLD EKDAGVFISV VHSINRMGED VSRTILSLVD TSEWMKKVAT
DIKTISEQAK QGVLEQERQT ELAATAMTQM VSTVQEVSHN AATTAQAADI AQGSAKHGDE
LIGTIVNKIS DMKSQIHQTK GVIEHLAADT NSISSIIETI SQVAEQTNLL ALNAAIESAR
AGEHGRGFAV VADEVRNLAK RTSEATAEIQ QQITTLQKGA QQSVEVMLKN VTIADETALM
VDQAHQALGD IVTQVESITD MSHQIATASE EQHAVAEEIN KNISVMADLA LKNARHTNHT
NLSSLKVYNM SQEIGSLLHR FQVDAKMFNS NEAQSKLFVK WGPELDIGMP EINRQHQRLV
SLINELHRTL SEAYGLEAIK RIVQGLVDYT ANHFSYEEEL FARFGYPQTV AHKEKHAQLV
DQVLDFQKRV GRGEDVADEL MAFLKAWLVN HIQKSDKEYT QFLLAHGAE
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