| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3204 |
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| Symbol | |
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| ID | 4253774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3824791 |
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| End bp | 3825630 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638119845 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_735331 |
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| Protein GI | 113971538 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000772302 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000217557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | GTGCGACAGT TGTGTCAGCT GTTTGATGTT CATCCGAGCG GGTATTACGC GTGGAGGGGC
TGCGCAAAGT CGAAGCGACA ATGTAACAAT GAACGACTTA TAGGCCAACT CAAACAATGT
TGGCTTGAGT CTTGTGGTGT CTATGGATAC CGTAAACTCC ATCGAGATCT GCGTGATCTT
GGCGAGCAAT GCGGTATTAA TCGTGTACAT CGCCTGATGC AGCGAGCAGG ACTGCGAGCG
CAAGTTGGCT ATCGCAAGCC TAGAACTCGT AGTGGTGAGC AGCATGTTGT AACGCCAAAT
CGCTTAGAAC GGCAATTCAA CCCCTTAGCG CCGAACAAAG TGTGGGTGAC GGATATTACG
TACATCAAAA CGCATGAAGG TTGGCTCTAT CTTGGCGCTG TAATGGACTT GTTCTCACGT
CGAATTATTG GTTGGTCAAT GGGCCGTCGT ATCACCAAAG AGCTTGCGTT ATATGCTTTA
TTAATGGCGG TATGGCGTCG TAAACCTGCT GGCAAAGTGT TGGTTCATTC AGATCAAGGA
AGCCAATACA CGAGCCATGA TTGGGGTGAG TTTCTAAGCG CTCATGGTTT GGAAGGTAGC
ATGAGCCGTC TAGGCAACAG CCATGATAAC GCAGTAGCAG AGAGTTTCTT TCAACTGCTG
AAACGTGAAC GAATTAAGCG AAAAATCTAT GCGATCAGGG ACGACGCAAA GATGGATGTG
TTTAATTATA TTGAGATGTT TTACAACCCG AAACGACAGC ATAGTTCCAA TGATGGGCTA
TCACCGTTAG AGTATGAACG TCAGTATTTT AATGAGGCTA AAAGTCGTCT AGTGAAGTAG
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| Protein sequence | MRQLCQLFDV HPSGYYAWRG CAKSKRQCNN ERLIGQLKQC WLESCGVYGY RKLHRDLRDL
GEQCGINRVH RLMQRAGLRA QVGYRKPRTR SGEQHVVTPN RLERQFNPLA PNKVWVTDIT
YIKTHEGWLY LGAVMDLFSR RIIGWSMGRR ITKELALYAL LMAVWRRKPA GKVLVHSDQG
SQYTSHDWGE FLSAHGLEGS MSRLGNSHDN AVAESFFQLL KRERIKRKIY AIRDDAKMDV
FNYIEMFYNP KRQHSSNDGL SPLEYERQYF NEAKSRLVK
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