| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3195 |
|---|
| Symbol | |
|---|
| ID | 4253765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 3816922 |
|---|
| End bp | 3817707 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638119836 |
|---|
| Product | molybdenum ABC transporter, periplasmic molybdate-binding protein |
|---|
| Protein accession | YP_735322 |
|---|
| Protein GI | 113971529 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0725] ABC-type molybdate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR01256] molybdenum ABC transporter, periplasmic molybdate-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0406926 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00000166926 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCGC TCAAAGACTT TATTCGTTTT ACCACAGCCT CAGTCGTTGG CTTAGCCCTC
AGTTGCAGCA TCAGCTTTGC CGCAGACCAA GAAAAAGTGA CGGTTTTTGC CGCCGCATCC
CTCACGAATG CGCTTAATGA GATTGGCCAG CAGTACGAAA AGGAACATCA AACGAAAGTG
ATTTTCTCCT TTGCCTCCTC CTCAACACTC GCCAAACAAA TCGCTAATGG TGCGCCCGCC
GATCTGTTTA TCTCCGCCAA CCAAAAATGG ATGGATTACC TCGTCGAGGC CAAGGCGGTC
AATGCCGATA GCCGTATTAC CCTGTTAAAA AATACCTTAG TGCTGATTGC CGAAAAGAAC
AGCCCGGTAA ACCAAGTCAC ACTGAACAGC GATTGGGATA TTAAGGCAGC GGTCAATGGC
AGCCGTTTAG CGGTGGGCGA CCCTGACCAT GTCCCAGCCG GACAATATGC CAAGCAAGCG
CTTGAAAACC TGAATCTTTG GAAAACCGCA GAACCACTGC TTGCAAGAGC AAACAATGTC
CGCGCCGCTT TAGCATTAGT GGAACAGGGC GAAGCCCCGC TCGGTATCGT TTACTCGACC
GATGCCAAAG TCGCGCAAAA AATTAAAATT GTGGCGACCT TCCCCGCGAC CAGCTATAGC
CCGATTGAAT ATCCCAGCGC CTTAACGAAG CTGGAATCCA CTGCCAGCGC TAAAGACTTT
AATCAATACC TTCAAGGCCC AAGCGCCACA GCAGTATTTG AAAAATACGG CTTTGGAGTG
AACTAG
|
|---|
| Protein sequence | MSSLKDFIRF TTASVVGLAL SCSISFAADQ EKVTVFAAAS LTNALNEIGQ QYEKEHQTKV
IFSFASSSTL AKQIANGAPA DLFISANQKW MDYLVEAKAV NADSRITLLK NTLVLIAEKN
SPVNQVTLNS DWDIKAAVNG SRLAVGDPDH VPAGQYAKQA LENLNLWKTA EPLLARANNV
RAALALVEQG EAPLGIVYST DAKVAQKIKI VATFPATSYS PIEYPSALTK LESTASAKDF
NQYLQGPSAT AVFEKYGFGV N
|
|---|
| |