| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3172 |
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| Symbol | ipk |
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| ID | 4253742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3790755 |
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| End bp | 3791609 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119813 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_735299 |
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| Protein GI | 113971506 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0254456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.902117 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAATG AGATTTCACG CAATTGGCCC GCGCCCGCCA AATTAAATCT GTTTCTGCAT
ATCAACGGAC GCCGCGCCGA CGGTTACCAT GAGTTGCAAA CCCTGTTTCA GTTTATCGAT
TGTTGCGATC TGCTCGATTT TCGGGTGACA CAAACACCTG AGCAGATATT GCACTCGGAC
ATGTCAGCCG TTGTCGCGGA TAGCGATAAC TTAATTCTGC GAGCCGCAAA ATCATTACAA
CAGGCGACAG GTTATCCTGG CGGTGCCGAA ATCTGGCTCG AAAAACGTTT ACCTATGGGT
GGCGGTTTAG GCGGCGGCTC CTCGGATGCT GCCACCACGC TCGTGGCGTT AAATCAATTG
TGGGATACCC AATTATCTAA CGATGAATTG GCGACGATTG GATTAAAACT CGGTGCCGAT
ATCCCTGTTT TTATTCGCGG TTTCGCGGCA TTTGCCGAAG GTGTTGGCGA ACGTTTACAG
GCGGTGACGC CCACTGAGTT TTGGTATTTA GTGATAGCGC CCGATGCCCA TGTTTCAACC
GCTGCTGTGT TCCAAGATCC TTTGCTACCC CGCAATACAC CTAAGCTTGG CATCGACACG
TTAATGAGCC AACCTTGGGC AAATGATTGC CAAGATCTGG TCGTTTCCAA ATACCCTCAA
GTTGCCAAGG CCTTAGCCTG GCTGCTAGAA TATGCGCCGT CGAGAATGAC CGGAACGGGC
GCATGCGTGT TTGGGGAGTT TTCTTCGCAG CAGCAAGCTC TCGCAGCCTT GGCGAAATTA
CCGTCTGATA TGCAAGGATT TGTTGCAAAA GGGATGAATA TTTCGCCGCT CATAGTGCGA
CTCAATCGTC CATAA
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| Protein sequence | MSNEISRNWP APAKLNLFLH INGRRADGYH ELQTLFQFID CCDLLDFRVT QTPEQILHSD
MSAVVADSDN LILRAAKSLQ QATGYPGGAE IWLEKRLPMG GGLGGGSSDA ATTLVALNQL
WDTQLSNDEL ATIGLKLGAD IPVFIRGFAA FAEGVGERLQ AVTPTEFWYL VIAPDAHVST
AAVFQDPLLP RNTPKLGIDT LMSQPWANDC QDLVVSKYPQ VAKALAWLLE YAPSRMTGTG
ACVFGEFSSQ QQALAALAKL PSDMQGFVAK GMNISPLIVR LNRP
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