| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3169 |
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| Symbol | prfA |
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| ID | 4253739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3787498 |
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| End bp | 3788589 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119810 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_735296 |
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| Protein GI | 113971503 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0178961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGAAT CCGTTATCCG CAAGCTGGAA GGCTTGCTCG AGCGCAATGA AGAAGTCTTA
GCCTTGCTTG GTGATGCGTC TGTCATCGCC GATCAGGAGC GTTTTCGCGC GTTATCCAAA
GAATATTCTC AGTTAGAAGA AGTGGTTGCA GGCTTCAAAG CCTACCAGCA AGCCCTGGCG
GATCTCGAGT CTGCCAAGGA AATGCTGGAA GAAGATGACG CTGAAATGCG CGAAATGGCG
CAGGAAGAAA TCAAGGCGGC TAAAGCCGAA CTCGAGCGTC TCGAAGCCGA GCTGCAAATT
CTGTTACTGC CAAAAGATCC TAACGACGAC ACCAACGCCT TTATCGAAAT TCGTGCCGGT
GCGGGTGGTG ACGAAGCCGC AATCTTCGCG GGTGACCTGT TCCGTATGTA TAGCCGTTAT
GCCGAAGCCA ACCGTTGGCA GCTCGAGATC ATGAGCTCGA ACGAAGGCGA GCACGGCGGT
TTTAAAGAAA TCATCGTTAA AGTTAGTGGT GAAGGTGCCT ACGGTAAACT CAAGTTTGAA
TCCGGTGGTC ACCGTGTTCA ACGTGTGCCT GAAACTGAAT CTCAGGGCCG TGTACACACC
TCTGCCGTAA CTGTGGTAGT CATGCACGAA GTGCCTGAAG CAGAAGCGAT TTCAATCAAC
CCAGCCGATC TGAAGGTCGA TACCTTCCGT TCATCGGGCG CCGGTGGTCA GCACGTTAAC
AAAACCGATT CTGCTATTCG TATTACTCAC ATTCCTACCG GGATTGTGGT GGAATGTCAG
GACCAACGTT CACAGCATAA AAACCGCGCT CAAGCGATGA GCGTGTTAGC CGCGCGTATC
CAAGCCGTTG AAGACGAAAA GCGCCGCAGC GCCGAAGAGT CGACTCGCCG TAGTCTGGTG
GCCAGTGGTG ACCGCTCCGA GCGTGTGCGT ACCTATAACT TCCCACAAGG CCGCGTGAGT
GAACACCGTA TCAACTTAAC CTTATATCGC TTAAACGAAG TGATGGAAGG CGACTTAGAT
GCGATTTTAG GACCGCTGAT GCAAGAGCAT CAGGCCGACC TATTAGCCGC TCTGGCTGAT
GAGCAGGGGT AA
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| Protein sequence | MKESVIRKLE GLLERNEEVL ALLGDASVIA DQERFRALSK EYSQLEEVVA GFKAYQQALA
DLESAKEMLE EDDAEMREMA QEEIKAAKAE LERLEAELQI LLLPKDPNDD TNAFIEIRAG
AGGDEAAIFA GDLFRMYSRY AEANRWQLEI MSSNEGEHGG FKEIIVKVSG EGAYGKLKFE
SGGHRVQRVP ETESQGRVHT SAVTVVVMHE VPEAEAISIN PADLKVDTFR SSGAGGQHVN
KTDSAIRITH IPTGIVVECQ DQRSQHKNRA QAMSVLAARI QAVEDEKRRS AEESTRRSLV
ASGDRSERVR TYNFPQGRVS EHRINLTLYR LNEVMEGDLD AILGPLMQEH QADLLAALAD
EQG
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