| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3160 |
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| Symbol | |
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| ID | 4253731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3779739 |
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| End bp | 3781139 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638119802 |
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| Product | ammonium transporter |
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| Protein accession | YP_735288 |
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| Protein GI | 113971495 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAC AGACAACCGC ACTTAACGCT AAGCTCCAGC ACGGCACGAA TACCCAAATC
AGCCTGCACA CTAAGCTCGC TCAGCCAAAC GCCCGTTATT CAAAATTGGG TTATCAGGCA
TTATTGGCGC TGTTCGCCAG CGGCTTTGCA GGCACGGCTT TGGCCGATGA GGCGCAGCTC
AGCGGCGCCA ACACTGCCTG GATTTTAAGC TCATCTGCCC TAGTCCTATT GATGACACTC
CCAGGGCTGG CGCTGTTTTA CGGCGGTCTG GTGCGCAGTA AAAACGTGCT ATCGATTTTA
ATGCAGTGTT TTTCTATCGC CGCTATCGCC TCCGTGCTGT GGTTTGTGGT GGGTTACTCT
ATCGCCTTCG ATACCGGCAA CGGTTTTATC GGCGGGCTTG GCAAAGCTTT TCTAGCCAGC
ATTGGTCGCG ATAGTGTCAG TGGGGATATT CCCGAACCTT TATTTATGCT TTTCCAAATG
ACCTTCGCGA TTATCACGCC AGCGCTGATC ATCGGTGGCT TTGCCGAGCG GATGAGATTC
TCCGCTGTAC TGATGTTTTC AAGCGCTTGG TTGCTGTTAG TCTATGCACC TATCACCCAC
TGGGTGTGGG GCGGCGGCTG GTTGGCCGAG CTTGGCCTGT ATGACTTTGC AGGCGGTACA
GTCGTACACA TTACTGCTGG GGTAGCGGCA CTGGTGGCGG CAAAAGTGTT AGGGCCGCGT
AAGGGATTCT TAAACTCGGC CATTATGCCC CATAACTTGA CCATGACAGT GACAGGCGCG
GGCATGTTGT GGGTAGGCTG GTTTGGCTTT AATGGCGGCA GCGCTTTAGG CGCCAATGGC
ACTGCGGCCA TGGCGATTCT CGCGACCCAT CTAGCCGCGT CGATGGGCGC CATCACGTGG
GCAGGTATCG AGTGGTATAA ATTCGGTAAG GCCAGTGCAC TCGGTATCGT CACCGGCATG
GTGGCAGGCC TTGGCACTAT CACTCCTGCA TCGGGTTATG TCGGCCCTGC TGGCGCGTTA
GTTATCGGTT TTCTTGGCGG CGTGGTCTGC TTCTTTTCAA CTGTGTACAT TAAACAAAAG
CTTAAGATTG ACGACTCACT CGATGTGTTC CCAGTGCACG GTGTCGGCGG TATTCTCGGT
ACTTTGCTGG CGGGAGTATT TAGTTCGACT CAGCTTGGGA TCTTCAGCGG TTATGGTTTT
GCCAGTGTCA ACCACACTAT GCTCGACCAA CTCGGGGCGC AGGCCATTGG CGTTATCGCT
ACGTTCAGCT ATACAGCGAT TGTAACGTGG TTATTGTTTG TGGTGATTGG CAAAATCCTC
GGTGGACTTC GCGTCAGCAC AGAGCAGGAA GTGAATGGCC TAGACCTTTC CGAACATGAA
GAAACAGGCT ATAGCCTGTA G
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| Protein sequence | MTQQTTALNA KLQHGTNTQI SLHTKLAQPN ARYSKLGYQA LLALFASGFA GTALADEAQL
SGANTAWILS SSALVLLMTL PGLALFYGGL VRSKNVLSIL MQCFSIAAIA SVLWFVVGYS
IAFDTGNGFI GGLGKAFLAS IGRDSVSGDI PEPLFMLFQM TFAIITPALI IGGFAERMRF
SAVLMFSSAW LLLVYAPITH WVWGGGWLAE LGLYDFAGGT VVHITAGVAA LVAAKVLGPR
KGFLNSAIMP HNLTMTVTGA GMLWVGWFGF NGGSALGANG TAAMAILATH LAASMGAITW
AGIEWYKFGK ASALGIVTGM VAGLGTITPA SGYVGPAGAL VIGFLGGVVC FFSTVYIKQK
LKIDDSLDVF PVHGVGGILG TLLAGVFSST QLGIFSGYGF ASVNHTMLDQ LGAQAIGVIA
TFSYTAIVTW LLFVVIGKIL GGLRVSTEQE VNGLDLSEHE ETGYSL
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