Gene Shewmr4_3157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3157 
Symbol 
ID4253728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3777766 
End bp3778128 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content48% 
IMG OID638119799 
ProductVanZ family protein 
Protein accessionYP_735285 
Protein GI113971492 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.829613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAACTA AAAACACCCT ATTCAAATTG GCTTTAGCCG TAGCCTTTGT CGTGATCAGT 
TATCTGGTGT TTTCCAGACC AACCTATTCG CAAAGTATCC CCAATATCGA TAAGGTAGGC
CATCTTGGGA GCTTCTTCTG TCTCTCTTAT CTGACCTTTC TCGCCTTTCG CCCTAAGTGG
TACTGGCTCT CGCTGGTGCT TGCCGCCTAC GCGATTTTGA TTGAGCTAGT GCAATCGCGT
TTACCCTACC GCAGCGCCTC TGTGGGCGAT GTGTTAGCGG ACTTTGCTGG TATCGCTTTG
TTTTACTTCT GTCTTTGGGC CTATCGAAAA TACTTTAGCG CCGCCCAACT CAAGGAAGAA
TAA
 
Protein sequence
MITKNTLFKL ALAVAFVVIS YLVFSRPTYS QSIPNIDKVG HLGSFFCLSY LTFLAFRPKW 
YWLSLVLAAY AILIELVQSR LPYRSASVGD VLADFAGIAL FYFCLWAYRK YFSAAQLKEE