Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3157 |
Symbol | |
ID | 4253728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3777766 |
End bp | 3778128 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638119799 |
Product | VanZ family protein |
Protein accession | YP_735285 |
Protein GI | 113971492 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.829613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATAACTA AAAACACCCT ATTCAAATTG GCTTTAGCCG TAGCCTTTGT CGTGATCAGT TATCTGGTGT TTTCCAGACC AACCTATTCG CAAAGTATCC CCAATATCGA TAAGGTAGGC CATCTTGGGA GCTTCTTCTG TCTCTCTTAT CTGACCTTTC TCGCCTTTCG CCCTAAGTGG TACTGGCTCT CGCTGGTGCT TGCCGCCTAC GCGATTTTGA TTGAGCTAGT GCAATCGCGT TTACCCTACC GCAGCGCCTC TGTGGGCGAT GTGTTAGCGG ACTTTGCTGG TATCGCTTTG TTTTACTTCT GTCTTTGGGC CTATCGAAAA TACTTTAGCG CCGCCCAACT CAAGGAAGAA TAA
|
Protein sequence | MITKNTLFKL ALAVAFVVIS YLVFSRPTYS QSIPNIDKVG HLGSFFCLSY LTFLAFRPKW YWLSLVLAAY AILIELVQSR LPYRSASVGD VLADFAGIAL FYFCLWAYRK YFSAAQLKEE
|
| |