Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3155 |
Symbol | |
ID | 4253726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3775630 |
End bp | 3777027 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638119797 |
Product | major facilitator transporter |
Protein accession | YP_735283 |
Protein GI | 113971490 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00901] AmpG-related permease |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTATGT TCGTAATCGG TTTAAATCGG CGCATCTTAG AATTCTTTAG CGTTTACTAC CATAAGCGCG TGTTGATACT GCTGTTACTC GGCTTTTCTG CCGGCCTGCC ATTAATGTTG GTCTTTTCAA CCTTGTCTTT TTGGCTGCGG GAAGCGGGAG TCGACCGTAC TTCTATCGGG TATTTCAGCT GGATAGCGCT GGCTTATGCC TTCAAATGGG CCTGGTCGCC CTTGGTGGAC AGATTATCTC TGCCCATACT GACGCGCTTT TTAGGTCGTC GGCGCAGTTG GATGTTGTTC GCCCAGCTGC TATTGGTCGG CGCGATTTTG GGTATGTCCT TTAGCGACCC ACTGCAAGAT CTCGAACGCT TGGCCGTATT TGCCCTGATG GTCGCCTTTG CATCCGCCAC CCAAGATATT GTGATTGATG CCTTTCGTAT CGAATCTGCC CCCGAAAAAA TGCAGGCCGC GCTTGCTGCC GCCTATCAGG TGGGCTATCG CAGCGCCATG ATTGTGGCGA CCGCTGGTGC ACTCAGCATC GCCGCTTGGG TTGAGCCAGG CAATACCGAA TATAACCTGC TCGCTTGGCA AACTTCCTAT TTGGTGATGG CAGGACTGAT GTTTGTCGGG GTGTTAACAA CGCTTTTTAG CCGCGAGCCA CAGGTCGATA CCCGCGCCGC CGATGAGACC GAATTAGCGG TAAAACAACG CTTGAGCGAG CGTTATCCCA AGCCCGTTGC GGCGAGTCTC TCATGGATTT ATACCGCCAG CATACTGCCC TTTATTGACT TTTTTAAACG CTATGGCCGT AGCGCCATTT TGATTCTTTT GCTGATTTCC TGCTATCGCA TTTCGGATAT TGTGATGGGG ATTATGGCCA ACGTGTTCTA CGTGGACATG GGATTTAGCA AAGAAGAAAT TGCTTATCTG AGTAAGATCT ATGGCCTTAT CATGACCTTA GTTGGCGCAG CCTTTGGCGG TATCCTATTA GCCCGCTTCG GCACAATGAA GATTTTATTC CTTGGCGCCC TCTTGGTCGC CGTCACCAAT TTGCTGTTTG CTTGGCAGGC GATGATTGGG TACAACGTCC AATTTTTAAC CTTCGCGATC TCAGTCGATA ACTTTAGTGC CGGTATTGCC ACCGCCGCCT TTATCGCTTA CCTCTCGAGC CTCACCAGCA GCGGCTACAG TGCAACCCAA TATGCGCTAC TCTCCTCAAT TATGTTGCTC TTCCCTAAGT TTATTGCCGG CTTCTCGGGC GCCTATGTCG ATGCCTATGG CTATGTGAAC TTCTTTGTCG CTGCCAGTGT GATAGGTTTT CCCGTGTTGC TGCTTATTCA TTTAGTGAAT AGATACGTGC CCCATGGCAG CAAAGATAAC GCTGAATCTA AGCAATAA
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Protein sequence | MLMFVIGLNR RILEFFSVYY HKRVLILLLL GFSAGLPLML VFSTLSFWLR EAGVDRTSIG YFSWIALAYA FKWAWSPLVD RLSLPILTRF LGRRRSWMLF AQLLLVGAIL GMSFSDPLQD LERLAVFALM VAFASATQDI VIDAFRIESA PEKMQAALAA AYQVGYRSAM IVATAGALSI AAWVEPGNTE YNLLAWQTSY LVMAGLMFVG VLTTLFSREP QVDTRAADET ELAVKQRLSE RYPKPVAASL SWIYTASILP FIDFFKRYGR SAILILLLIS CYRISDIVMG IMANVFYVDM GFSKEEIAYL SKIYGLIMTL VGAAFGGILL ARFGTMKILF LGALLVAVTN LLFAWQAMIG YNVQFLTFAI SVDNFSAGIA TAAFIAYLSS LTSSGYSATQ YALLSSIMLL FPKFIAGFSG AYVDAYGYVN FFVAASVIGF PVLLLIHLVN RYVPHGSKDN AESKQ
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