| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3141 |
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| Symbol | |
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| ID | 4253712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3760573 |
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| End bp | 3764754 |
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| Gene Length | 4182 bp |
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| Protein Length | 1393 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638119783 |
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| Product | protease domain-containing protein |
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| Protein accession | YP_735269 |
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| Protein GI | 113971476 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGACAA AATTATCTAT CGCTATCTCG GCTGCACTTT TATCAAGTGC AGCAGTTGCA
GACAATAATA CTCTGCGTAT CCACCAAGTA AGTAATAACC TCGACAGCAA ACAGCAAAAT
TCAACCTTAA CTTCAGTCAG TGGCATGAAA GATCAATATG ACCAAGAAAC TGGAGAAACG
ACTTTTCAAT GGGCCAAATC AAATCAAAGA ACACCCGATA TGGGAGCCCT TGATACACAA
TACAAACTTG CTTTTGCTGC TGATTACTAC CTTAATCAAG TAGCAGGGTT ATCAACCAGC
AAAAATGCAA GCTTGAAGCC TATACTTGCT AACCTACATG ATACAGGCCG TGGTGCTAAA
ATTGCTAAGT ACCAGCAAGA ATATCAAGGT GTTGAAGTCT TCAATCGTAA TTTCAATGTG
TTGATGAATA GCAATTTTGA ACTCGTAGCA ACCTCAGGTA GCTTATTGCC TTCCAGTACA
GCAAACACAA CTGAGCTAAA GGGGATCAGG ACAACTTTTA ATGATCCTAT TAATGCAGTG
AAAGCTGCTT CAAAAGCAAT GGGCGTTACC GATGCAAATA TCAACGCAAC GACATTAGTT
GGCAAATATC AATCTTTCAA TGTAACAGCT ACTGATAGTG CAAAAATACT CAAAGGTGAG
CCTCGTGCTA AACCGGTGTT TTTTGAATTA AAAGGTTCAC TGATCCCTGC TCATTATGTA
GAAATTGAAG TCGCTGATAA CGATAGTGTT GACTCTGAAT TCTATTCTTT TGTCATTAGT
GATTTAGATA ACAAAGTTCT CTTTAAACAT AATCTGACAG CACAAGAAGC CGCATTTAAC
TACCGTATAT ATGCTGATGA ACAGGGTGTA CCTTGGGACG GTCCACATGG CAATGTCATC
CCTGCAATGA GCGAAGACCA AGTTGATGCA ACTGAATATT TAGATGCTCC AATGGTCACA
ATCACATCAG GGCCCATCAG TACAATGGAT CCTTGGTTAG CGGAAGATGC CACCACAACA
TCAGGTAATA ACGTCTTTGC CTATGTAGAC GCACTAGCCC CAGATGGCTT TACCAATGGT
GACTTCACAG CAGAAATCAC TAGCGATAAA ACTTTTGACT ATCAATATAA TACAAATCAA
GTCGAAAGTT CTGTTAACAA CCGCAAAGCA TCTATTGTTA ACCTGTTCTA TATGAACAAC
TATTTGCATG ATTTATTTTA TGATCATGGG TTCGATGAAG CCTCAGGAAA TGCTCAAGCT
CAAAACTACG GCCGTGGCGG TGAAGAAGGT GATGCAATTA GAGCTGAAGT ACAAGATAAC
TCAGGTTTTA ACAATGCAAA CATGAGCACC CCAGCTGACG GCCGCTCACC AAGAATGCAG
ATGTATCTTT GGGATAGTAA AGATGCAGTC AATGGTGAGG ACTATGGTGT AACCGTAACC
TCTGATACAA CTATCGGGTT ACTCCCATCG ACACAACGCG CAAGCTTTGG TCAAGGTCAA
TTTGAAATTA GTGGTGAAGT GGTTCGCCTT GTTGATGGTG TTGCCCCTGT AAATGACGGA
TGTTCAACAC CAACAAATGC TGCCGACCTT GCGGGCAAAA TTGCCATTAT TGACCGTGGT
GTTTGCGGCT TTACCGTGAA AGCTAAATTC GCCCAAACTG CAGGCGCTAT TGGTGTACTC
ATTGCTAACA ACTCGGGTAC CACAGAGCCA GCGCCAATGG GCGGCAGCGA CGATACGGTA
AAAATTCCAA GCATCGGCTT GTCAAAAAAT GACGGTGCAT TGATTTATGC CCAGCTCGAT
GCAGCCAAAC CAGTCAGTGT CACCATGTTC AACAAAAAGC CGTTTAAAGA CAGCTCTTGG
GATAATGCTA TTGTTGCCCA TGAATGGGGA CATTACATCA GTAACCGTTT AGTGGGTAAC
TCTTCGGGTT TAATCAACCA ACAGGGCCGT TCTATGGGCG AAGGTTGGGG AGACTTCCAT
GCATTGCTCG TTATATCTGA GGCAGATGAT GCATTAATCC CAGGTAACGA GTTATTCCAA
AAACCTTATG CAGCTATTAG TTATGTTGCC TCTTTCTATT CAGGCATTCG TAATTACCCT
TACAGCACCA ACATGGAAGT GAACCCACTC ACCTTCGGCA ATGTTGAACT AAATAAAGGA
ACTGGGGCTG ATGTTAATGG TAATGCCGAG GTCCATGATG CAGGTGAACC ATGGGCTGCA
ATGCTTTGGG ATTGTTATGT TTCTTTAATC AATGATGAGC GCTATACCTT TGCAGAAGCA
CGTAGCATGA TGATGAGTTA TCTCGTTGCT GCCTATAAAA TGACGCCTAT TGCGCCAACT
TATACAGAAG CCCGAGATGC CCTGTTAGCA GCGGCGTACG CAAATGAGCC AAAGGACTAT
GAACTATTCG TAAAAGCCTT TGCACGTAGA GGTATGGGTC TCGATGCAGT ATCGCCTGAA
CGTTATGATA CCAAACATCG CGGAGTGGTC GAATCTTATA AGACTGAACT ATCTGCCTTC
AATGTGACGA ATCATGAAAT CAATGCTGAC TATGAAGGCT TAACTGTAGG TTATTGCAGT
AAAGACGGCA TTTTAGATAA AGGTGAAACG GGTACTGTCA GCTTCACGAT AACAAACCGT
GGAAGTAAAA CTTTTGAGGG GCTAGAAGGA AAAGTTGAAG TTGTCAGCGG ACAAGATATT
ACGCTTGCAA ACGGCGGCAA AGTCACCTTT GGTGCCCTAG ATTTATTTGC GGAAGTAACT
AGTACTCCGA TAGAAATGAC TCTTAATGAA GCTACAACAG CCGATACTGT AGAGTTAAAA
CTGACGTTCC CAACTCTAGA AGGAACTGAA GTAAATGAGT ACAACTTTAC GACCATCGTT
AACATGGACT TTAAAGACAA AGCACCTGAA AGCAATATGT CTACGAGTGA TATGGAAAGC
CAAGTTGGAC TAGTTGACTT CAAGGAGCAT GTGCTAGATG GCGGAGATCA GGCTAAGGGC
ACCGCGAAAC TTGAAACTCG ATATGCAGAT TATTTCCCTG TTGGCACTCA ATATCTACGT
ATTGCCAATA ATGGTTTTGC ATCCGATGTT GCTTATGAAA CCAAACCTGT AACTGTTGGT
TACGGTGGTG ATTTCAAAAT CAGCTGGTTC CAATATTTTG AAATTGAAGA AAACTACGAC
GGTGGTGTCG TCGAAATTAG CGTCAACGGA GGGGATTGGG CCGATGTCAC TAAAATGGGC
GGTGTCTTTG AAGGTGCAGG CTACACTGGT GAGTTAGAAA ATTTACTCCC AGGCCGTCTG
GCATTTACCG GTTTCATGGA TTTCCCTGGT GATATTGAAA CGGTTAACTT TGGAACTAAG
TTAAATGGTA ACGAAGTTCG CTTCCGCTTC CGTATAGTGT CGGATACCAA CACAAATGAG
TTTGGTTGGG TTATTGATAA CGTCACCTTC TCAAATATTG TGACTAGCGT CTTCCATGAT
CAAACTGCAG GTGATGTAAA TCCATGCGCT AACCGCTTAC CAAATGTTAG CTTGGTCACC
AGCGCTACAG AGGTGAAAGA AGGCCAAGTT GTGAGTATTA ATGCTACTGC TATTGATGCG
AATGCTGATG ACACCCTTAC TTATACTTGG GTTCAAACTT CAGGAACTGC TACAACACTA
GCAGGAAAAG ATACTGCTTC GTTAAGTTTT ACAGCGCCAA ATGTTGATGC TGATGAAGTT
TTAGAATTCG CATTAACTGT AAATGATGGT ACGGGTGATG TTGTAAAAGC TGCATCAATA
ACAGTAAAAA ACAATAATAT TCCCGATATC AGTTTGACTC CAAGTGCGAC TGAGGTAAAG
GAGGGTGAAG ACGTTAGCAT AAACGCTGTA GCAGTTGATG CTGATTCCGG TGATGTACTC
ACCTACTCTT GGGCACAAAC TTCAGGAACT ACAGTCACCC TGAGTGGTGC AGACACAGCA
TCATTAAGCT TCACAGCTCC ACAAGTTAGT GCGAATGAGA CTCTTGAATT TACGTTAACC
GTAAATGATG GAACTGAAGA TGCAGTAAGC ACTATATCCG TGAAAGTAAA TGATGTGCCG
ACTACTACAC CAACTCCTAC ACCTCATAAA TCTTCTGGAG GCAGTTTAGG TTGGTTAACG
TTTATTTTAT TGCCTTTAGC AGCATTACGT CGCCGTAAAT AA
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| Protein sequence | MKTKLSIAIS AALLSSAAVA DNNTLRIHQV SNNLDSKQQN STLTSVSGMK DQYDQETGET
TFQWAKSNQR TPDMGALDTQ YKLAFAADYY LNQVAGLSTS KNASLKPILA NLHDTGRGAK
IAKYQQEYQG VEVFNRNFNV LMNSNFELVA TSGSLLPSST ANTTELKGIR TTFNDPINAV
KAASKAMGVT DANINATTLV GKYQSFNVTA TDSAKILKGE PRAKPVFFEL KGSLIPAHYV
EIEVADNDSV DSEFYSFVIS DLDNKVLFKH NLTAQEAAFN YRIYADEQGV PWDGPHGNVI
PAMSEDQVDA TEYLDAPMVT ITSGPISTMD PWLAEDATTT SGNNVFAYVD ALAPDGFTNG
DFTAEITSDK TFDYQYNTNQ VESSVNNRKA SIVNLFYMNN YLHDLFYDHG FDEASGNAQA
QNYGRGGEEG DAIRAEVQDN SGFNNANMST PADGRSPRMQ MYLWDSKDAV NGEDYGVTVT
SDTTIGLLPS TQRASFGQGQ FEISGEVVRL VDGVAPVNDG CSTPTNAADL AGKIAIIDRG
VCGFTVKAKF AQTAGAIGVL IANNSGTTEP APMGGSDDTV KIPSIGLSKN DGALIYAQLD
AAKPVSVTMF NKKPFKDSSW DNAIVAHEWG HYISNRLVGN SSGLINQQGR SMGEGWGDFH
ALLVISEADD ALIPGNELFQ KPYAAISYVA SFYSGIRNYP YSTNMEVNPL TFGNVELNKG
TGADVNGNAE VHDAGEPWAA MLWDCYVSLI NDERYTFAEA RSMMMSYLVA AYKMTPIAPT
YTEARDALLA AAYANEPKDY ELFVKAFARR GMGLDAVSPE RYDTKHRGVV ESYKTELSAF
NVTNHEINAD YEGLTVGYCS KDGILDKGET GTVSFTITNR GSKTFEGLEG KVEVVSGQDI
TLANGGKVTF GALDLFAEVT STPIEMTLNE ATTADTVELK LTFPTLEGTE VNEYNFTTIV
NMDFKDKAPE SNMSTSDMES QVGLVDFKEH VLDGGDQAKG TAKLETRYAD YFPVGTQYLR
IANNGFASDV AYETKPVTVG YGGDFKISWF QYFEIEENYD GGVVEISVNG GDWADVTKMG
GVFEGAGYTG ELENLLPGRL AFTGFMDFPG DIETVNFGTK LNGNEVRFRF RIVSDTNTNE
FGWVIDNVTF SNIVTSVFHD QTAGDVNPCA NRLPNVSLVT SATEVKEGQV VSINATAIDA
NADDTLTYTW VQTSGTATTL AGKDTASLSF TAPNVDADEV LEFALTVNDG TGDVVKAASI
TVKNNNIPDI SLTPSATEVK EGEDVSINAV AVDADSGDVL TYSWAQTSGT TVTLSGADTA
SLSFTAPQVS ANETLEFTLT VNDGTEDAVS TISVKVNDVP TTTPTPTPHK SSGGSLGWLT
FILLPLAALR RRK
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