Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3140 |
Symbol | |
ID | 4253711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3759873 |
End bp | 3760367 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638119782 |
Product | DNA-binding transcriptional regulator AsnC |
Protein accession | YP_735268 |
Protein GI | 113971475 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAATTC ATTATGTTAT AGAGAGTTTA TTTATGGAAA CCGCATTTCA GCGCGATCAG CTTGATAACC ATATCCTCGA AGCCTTAATG CAAGACGCAC GCACCCCGTT TGCCGAGCTT GCCAAACGTT TCGGCGTGAG TGCGGGTACT ATCCATGTGC GTGTCGAGAA AATGAAACAA GCGGGGATTA TCACGGGTGC CCAGATCACC ATCAATCCCA AGGCACTAGG TTACGATGTC TGCTGTTTTA TTGGAATTAA TCTCAAAAGT GCCGGCGACT ACCCCGCCGC CATCGCCAAG CTAAACGCCC TAGAAGAAGT GGTAGAAGCC TACTACACCA CAGGCAACTA CAGCATTTTT GTCAAAGTCA TGTGCCAATC CATCGATGGC CTGCAACACG TGCTGATTAA CCGCATCCAA TCAATCGACG AAATTCAATC GACGGAAACC CTTATCAGCC TGCAAAACCC TATCACAAGA GCGGTAAAGC CTTAG
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Protein sequence | MTIHYVIESL FMETAFQRDQ LDNHILEALM QDARTPFAEL AKRFGVSAGT IHVRVEKMKQ AGIITGAQIT INPKALGYDV CCFIGINLKS AGDYPAAIAK LNALEEVVEA YYTTGNYSIF VKVMCQSIDG LQHVLINRIQ SIDEIQSTET LISLQNPITR AVKP
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