Gene Shewmr4_3134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3134 
Symbol 
ID4253705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3752510 
End bp3753682 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content53% 
IMG OID638119776 
Producthypothetical protein 
Protein accessionYP_735262 
Protein GI113971469 
COG category[R] General function prediction only 
COG ID[COG4637] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACTA CCCTAGCCAT CTCTAACTAT CGCACCTTGA GGGAGATAGT CTTACCCCTT 
GGGCGCCTGA ATCTAGTGAC CGGCGCTAAC GGTAGTGGCA AATCCAATTT ATACAAAGCC
TTACGGCTAC TCGCTCAAAC AGCGCAGGGT GGCGTTGTTA ATGCTTTGGC GCAGGAAGGC
GGCTTAGACT CCTGTTTTTG GGCGGGACCT GAAAATCTCA CCAAGGGCAT GTTAGCGGGC
GATACGCCAA TTGAAGCTAC AGTCAGACAA GCGCCCAAAC GCCTAAAATT GGGATTTGCG
GGCGAAGATT TTAGTTATCT GATTGAGCTT GGCCTCCCCA AACCCGACTC CACCACCCTG
TTTGGGTTAG ATCCGCAAAT TAAACGTGAG GCGATTTGGA ATGGCCCCAA ATATCGCTCC
GCCAGCGTGT TGGTGGAGCG GCGCGGTCCT ATGGTGAAGA GTCGCAGCCC TGAGGGACAA
GGTTGGCTCA CCTTGAGCGC CCATCTGCAA AGCGGTGACA GTATTTTTAC CGAACTTGCC
GATCCTGAAC GTAGCCCTGA AGTATTAACG CTAAGGGACA GCATTCGCGC CTGGCGGTTT
TACGATCACT TTCGAACCGA TGCCGAAGCC CCAGCGCGTC GTCCACAGCT AGGGACGGCT
ACGCCCGTAT TGCACCATGA CGGTCGAGAT CTCCCCTCTG CCATACAAAC TATTTTTGAG
ATTGGCGATA AAGCGGCATT TGATCATGCG GTGACCGATG CTTTTCCGGG GGCCAAGGTG
CGTATCACGC CCCAAGCGGG TGGGATACTC CAACTCGAAT TCCACCAGCA GGGCTTATTA
AGGCCACTGC ATGCCAGTGA ACTCTCCGAC GGCACCCTGA GGTATTTATT GCTTATCGCC
GCATTACTCA CCCCAAGACC ACCCGAGTTA ATGGTATTAA ACGAGCCCGA AACCAGCCTG
CACCCCGATT TATTGCCCGC TTTAGCTCGG CTTATCGCTA AGGCTTCCGA GGTGTGTCAG
CTTTGGGTCG TGTCCCACGC TAACCGTTTG ATTAATGCCT TGAGCCAGTT TGAGCACTGC
AATACTTTGG CACTGGATAA AAATCTAGGG CAGACCCAAA TAGTGGGGCA GGATTTACTC
AATACGCCGA GCTGGCAATG GCAACTCAAA TAG
 
Protein sequence
MLTTLAISNY RTLREIVLPL GRLNLVTGAN GSGKSNLYKA LRLLAQTAQG GVVNALAQEG 
GLDSCFWAGP ENLTKGMLAG DTPIEATVRQ APKRLKLGFA GEDFSYLIEL GLPKPDSTTL
FGLDPQIKRE AIWNGPKYRS ASVLVERRGP MVKSRSPEGQ GWLTLSAHLQ SGDSIFTELA
DPERSPEVLT LRDSIRAWRF YDHFRTDAEA PARRPQLGTA TPVLHHDGRD LPSAIQTIFE
IGDKAAFDHA VTDAFPGAKV RITPQAGGIL QLEFHQQGLL RPLHASELSD GTLRYLLLIA
ALLTPRPPEL MVLNEPETSL HPDLLPALAR LIAKASEVCQ LWVVSHANRL INALSQFEHC
NTLALDKNLG QTQIVGQDLL NTPSWQWQLK