| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3131 |
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| Symbol | |
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| ID | 4253702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3749418 |
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| End bp | 3750665 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638119773 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_735259 |
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| Protein GI | 113971466 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACATT CAGCCTCAAC CGACACAACA TTGCCCGATA GCCATAGCCA AATCCGCTCG
CAATTTCCAA CCCTCTCGCA AATGTTGGGC GACTATCCCC TGTGTTATCT CGATACCGCG
GCCACCAGCC AAAAGCCGCA ATCCGTGTTA GATGCCATGG CTCAGTATTA CCTGAACGAC
AATGCCAATG TGCACCGTGC GGCGCACCAG TTATCGGCGC GCGCGACCTC TAGCTACGAG
AAAGTCCGCG ATGAGTTACA AGGGTTTATT AATGCAAAGC GCCGCGAAGA AATCATCTTC
ACCCACGGCA CCACAGAGTC GATCAATCTA GTCGCCTATG GCTTAACGCC ACAGATTGCT
GCGGGCGATC TGATTTTGAT CGATACCGCC GCCCACCACG CCAACATAGT GCCATGGCAA
GAATTGGCAA AACGCACGGG CGCCATCATT AAACCTATCC CTCTCGATCG TGATGGCAGG
CTCGATCGCC ATGCCTATCA AGCGCTGCTC GCCCTCAAGC CCAAAGTAGT CGCCCTGTGC
CATGTTTCTA ATGCCTTAGG CACAGTGAAT CCTGTTGTCG AATTAGTGCA GCAAGCCAAG
GCACAAGGGG CGATCACCTT AGTCGATGGG GCGCAGGCGG TTGCACACTT AAGCTTAGAT
ATGGCCGCTA TCGATTGTGA TTTTTATGTG TTTTCCGGCC ATAAGATGTA TGGCCCGACT
GGCATTGGTG TGCTTTATGG CCGCTTCGAT AAGTTAGATA CGCTCACGCC ACTGTTAACG
GGCGGTGAGA TGATTAAACG AGTGAGTTTC GATGGCACCG AATTTGGCAG CCTACCCAAT
CGCTTAGAAG CGGGTACACC ACCCATCAGT GAAGTCATCG GCCTAGGCGC CGCTATCCGC
TTTTTGCAAC AACACTTAAC GCCAGAGGTT CAGGCCCACG AGGCTGAGCT GCTGCAGTAT
TTACAGCACC AGCTGCGCGC CCTCGGAGAT GTGCATCTCT ATGCTGCCCA TAGTGATAAT
CTCGGTGCGG TTGCCTTTAA TCTGGGCGAT GAACACCATC AAGATGTCGG GATTTTATTA
GATCAACAAG GCGTTGCCGT GCGCTGCGGT CATCACTGCG CCATGCCCTT GATGCAAAGC
CTTAACCTGA AGGGCTGCTG CCGAGCATCG ATTGGTATCT ACACCAATAA AGCCGATATC
GACCGCTTTA TTGCCGCCTT AGCCTCAGTC AAAGAGTTGC TGCTCTAA
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| Protein sequence | MTHSASTDTT LPDSHSQIRS QFPTLSQMLG DYPLCYLDTA ATSQKPQSVL DAMAQYYLND
NANVHRAAHQ LSARATSSYE KVRDELQGFI NAKRREEIIF THGTTESINL VAYGLTPQIA
AGDLILIDTA AHHANIVPWQ ELAKRTGAII KPIPLDRDGR LDRHAYQALL ALKPKVVALC
HVSNALGTVN PVVELVQQAK AQGAITLVDG AQAVAHLSLD MAAIDCDFYV FSGHKMYGPT
GIGVLYGRFD KLDTLTPLLT GGEMIKRVSF DGTEFGSLPN RLEAGTPPIS EVIGLGAAIR
FLQQHLTPEV QAHEAELLQY LQHQLRALGD VHLYAAHSDN LGAVAFNLGD EHHQDVGILL
DQQGVAVRCG HHCAMPLMQS LNLKGCCRAS IGIYTNKADI DRFIAALASV KELLL
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