| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3127 |
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| Symbol | |
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| ID | 4253698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3742044 |
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| End bp | 3743999 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119769 |
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| Product | cysteine/glutathione ABC transporter membrane/ATP-binding component |
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| Protein accession | YP_735255 |
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| Protein GI | 113971462 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGT CGTTAGAAAA GTCCCTTCTC GTTTGGCTCA AGTCGCAAAA AAAGGCCTGT
GGCTGGTTTG TTAAGCTCTC CGTATGGTGT GGAATGTTAA GTGCTATTGC ATTGATAGCA
CAGGCTTATC TGATAGCCAC ACTCCTCGAT GGCGTCATTG TTGGCAATGC CTTGCAGGCA
TTTACGGATG GCGCAAATAG CATCCAAGCG CAATCAACTG TAGGGGCAAG CGATTATCTG
CCACATTTTA TGGCCTTGAT TGGCTTAATG TTGCTGCGAG CAATACTCGC CTATGGCCGC
GAGCGCGCCA GTTTTGAAGC GGGCAAACGC TTACGCCAAC AGATCCGCGG TGCGGTAATG
GATAAGTTAA CTCGGCTTGG CCCCGCGTTT ATTAAAGGCA AACCCGCAGG CAGTTGGGCG
AGCATAGTCT TAGAGCAAGT GGAAGATTTA CAAGATTTTT ATGCCCGTTA TTTACCGCAA
ATGACCCTTG CTGGCGTGAT CCCCTTTTTG ATCCTTATCG CAGTGTTTCC TATCAACTGG
GCGGCGGGGT TGATTTTGCT GTTAACTGCG CCACTTATCC CGTTGTTTAT GATCCTCGTC
GGTATGGGCG CGGCCGATGC CAACCGTAAA AACTTCAATG CCTTAGCCAG ATTAAGCGGC
CACTTTATGG ATAGATTAAA AGGGCTTTCG ACCTTAAAAC TCTTCTATCG GGGTGATGCT
GAACTCAAGG TGATTGAAAA AGCCTCGGAG GAGTTCCGTA GCCGTACTAT GTCTGTGCTG
CGCATGGCTT TTTTAAGCTC GGCAGTGCTA GAGTTTTTTG CCGCGGTATC GATTGCCGTA
TTAGCGGTTT ACTTTGGTTT CAGTTATTTA GGTCACCTCG ATTTTGGCTA CTATGGCGCG
CATGCTCAAC TTGGGCCTAA TGCGAATGAA GGCTTACCTT TTAGCCTGTT TGTCGGCTTG
TTTATCTTAA TTTTGGCGCC TGAGTTTTAT CAGCCCCTTA GGGATATGGG CACTCACTAT
CACGCTAAAG CGCAGGCGAT TGGCGCGGCC CAAGCATTGA TGACGCTGCT GGAACACCCT
GAGCCAGAGT CGGGTTCTGA ACAAGGTTCT TCGCAGGACA AGCTCGGGCA GCAAACGCGG
TTCGATAAGC TGACTCACCT TAGCGTAAAA GATCTAGAAG TCTTTAGTAC CGATGGCAGC
CGTTTACTCG GCCCCATTAG TTTTGAGTTG AAACAGGGCG AACACTTGGC TCTGGTTGGC
CCAAGCGGCG CCGGTAAAAC CAGTTTACTC AATGCCTTAT TAGGATTTTT GCCCTATAAA
GGCAAGCTGC TAATCGATGG GGTTGAACTC GCAAGCCTAG ATCTTGCCCA TTGGCGACAG
CAGTTAGCAT GGCTTGGGCA GGAGCCGCAG TTATTCCATG GCACAGTGCG AGAAAACGTC
GCCTTAGCCA ATCCTGAAAT GACAGATGAG CAGGTTTGGC AATTGCTGGA GCAGGCCAAT
ATCCATGAGT TTGTCCGCAG CCAACCCCTT GGTTTAGCCA CGCCGATAGG CGAGCAGTCA
TCGACCTTAT CGGTCGGACA GGCGCAACGT ATTGCGCTTG CGCGAGCATT GGGACAGGCG
GCGCAGGTCT TTATTCTCGA TGAACCGACG GCGAGTTTAG ACAGTGTCAG CGAACAACTC
GTTAGCCGCA CCTTAAAAGC GGCGATGGCG GGTAAGATGG GCATTATGGT AACCCACAGA
GTCGATCAGC TGGACCATAT GTCGTCCATC CTAGTGCTCG ATAAAGGCGA GATAGTCCAG
CGGGGGGATT TTGCGACGCT GTCAACTGAG GCGGGGTTAT TCCAAACTAT GTTGCATGAA
AATACTGAAT CAGTAGCCGA TATTGGGCTG GAATCGCCAA AACCTGATAC CCATAGCGAT
ACCGCGTTAG GGACAACCGA GGGAGCCGCA CAATGA
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| Protein sequence | MDKSLEKSLL VWLKSQKKAC GWFVKLSVWC GMLSAIALIA QAYLIATLLD GVIVGNALQA
FTDGANSIQA QSTVGASDYL PHFMALIGLM LLRAILAYGR ERASFEAGKR LRQQIRGAVM
DKLTRLGPAF IKGKPAGSWA SIVLEQVEDL QDFYARYLPQ MTLAGVIPFL ILIAVFPINW
AAGLILLLTA PLIPLFMILV GMGAADANRK NFNALARLSG HFMDRLKGLS TLKLFYRGDA
ELKVIEKASE EFRSRTMSVL RMAFLSSAVL EFFAAVSIAV LAVYFGFSYL GHLDFGYYGA
HAQLGPNANE GLPFSLFVGL FILILAPEFY QPLRDMGTHY HAKAQAIGAA QALMTLLEHP
EPESGSEQGS SQDKLGQQTR FDKLTHLSVK DLEVFSTDGS RLLGPISFEL KQGEHLALVG
PSGAGKTSLL NALLGFLPYK GKLLIDGVEL ASLDLAHWRQ QLAWLGQEPQ LFHGTVRENV
ALANPEMTDE QVWQLLEQAN IHEFVRSQPL GLATPIGEQS STLSVGQAQR IALARALGQA
AQVFILDEPT ASLDSVSEQL VSRTLKAAMA GKMGIMVTHR VDQLDHMSSI LVLDKGEIVQ
RGDFATLSTE AGLFQTMLHE NTESVADIGL ESPKPDTHSD TALGTTEGAA Q
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