Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3110 |
Symbol | |
ID | 4253681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3722567 |
End bp | 3723544 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638119752 |
Product | hypothetical protein |
Protein accession | YP_735238 |
Protein GI | 113971445 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00498184 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGAA TGCTAATGCG GGTTCTCACG TCGATACTCA TTTTGGCCGC GACCTTATCG CTTACGGGTT GTGGCGATGA CAGGCCAGAG AAAATTGAGA AGTATCAACA ACTCACTCAG CAGCGCCTCT CGACACTCAA TACTATGCTT GAGGACGGTC AGGTACGTAA CGCTAATCTG CTCAAGCAAT ATAGCAGTTT GCTCAAACAG CAAAAGCCCG ATTTTGCGCC ACTCTTGGAT GAATTAGCCA AGGATTCCAC CGCCGAAGGG CCAATGTATA CGTCGCTGAA GCGCCGCTTA GACGATGCCA AAAACTCGGC TAACTTTACC GATCTCGACC AGCAACTCGC CGAGGTTGAG AATCTCTATC AAGCGGCCGA TCCCAGCCTG TATAACGACA TGCTTTCCGA TCCCGTCAAC GTGATTGCCG ATATGTCGGA TGGCAAGCTT GCCCGCGTTA ATGCCATCAG TCGTGAAGCG GCAGCCCTTG CCAATAATGC CGAAGATTTT GGCCCTGGTA GCCAATTGGT GGGTAACCCT GCTTACGGCA GCTGGCAGAC AGACTCGAGC GGCATGTCTT TCTGGGCTTG GTACGGCATG TATTCGATGT TTTCGAATAT TTTCCACCGC CCCATTTATT ACGACCGTTG GTCGGGTAAC CGTGGCTACA GCTATTACAA CGACGTAGGT CGCTATCGCT ATACCTCGCC AAAACAAGCA CAGGCGCAGG AAAAAACCTT CGAGCAGACC AAAAAACGTT TCGATTCTCA AGGGAAACGC TTCGACAGCC CCTATTCAAA ATCGCGCACG GGTGCCACGG CTCTCTCCCG TGAGAGCAGC AGCGCGCCTA AAACCAATAC CACAGCGAAT AAGTCGAGCG CGCAGTCGGG CAGCAAATTC CGCTCAAATT ATTCTAAAGA CAGCAGTTTC CGTAATTCCA GCAACCGCAC GACCCGCAGT GTGCGCCGAG GCAAGTAA
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Protein sequence | MAGMLMRVLT SILILAATLS LTGCGDDRPE KIEKYQQLTQ QRLSTLNTML EDGQVRNANL LKQYSSLLKQ QKPDFAPLLD ELAKDSTAEG PMYTSLKRRL DDAKNSANFT DLDQQLAEVE NLYQAADPSL YNDMLSDPVN VIADMSDGKL ARVNAISREA AALANNAEDF GPGSQLVGNP AYGSWQTDSS GMSFWAWYGM YSMFSNIFHR PIYYDRWSGN RGYSYYNDVG RYRYTSPKQA QAQEKTFEQT KKRFDSQGKR FDSPYSKSRT GATALSRESS SAPKTNTTAN KSSAQSGSKF RSNYSKDSSF RNSSNRTTRS VRRGK
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