| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3096 |
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| Symbol | |
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| ID | 4253667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3705135 |
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| End bp | 3706748 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638119738 |
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| Product | signal transduction histidine kinase regulating citrate/malate metabolism |
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| Protein accession | YP_735224 |
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| Protein GI | 113971431 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.955955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGCC CTAAACGCTT AGAAACCTGG TTAATCAGTG GGGTGACTTG CCTGAGTTTG
TTGCTGTGCG CCTTATTTGG CGGCATCAGC TATCAAATTT TGAGCCGCAG TATTACTGAG
CAATCGGGCG CTAAGGCATT AGGGCTGGCA CATGCAGTCG CGACACGGGC CGATGTGATT
ACCGCTTTGC AGACTGGGCA TTCGAGCCCC AAATTGCTGG CCGCGATAGA AGGAATACGT
CTAGCATCTA AGGCCGATTT TATCGTGGTG GGCGATACTC ATAAATACCG TATCGTGCAC
CCAGATTCAG ATAAAATTGG CAAGAAGATG GAGGGCGGTG ACAGCCAAGC GGCATTAGAA
GGGGAGTCTT ATATCTCCGA GGCGCAGGGC AGTTTAGGTC GTTCTATTCG CGGTAAAGTG
CCAGTGCTTG ACGAGCAAGG CGAAATTATC GGCTTGGTTT CCGTGGGCTT TTTGAGTCAG
TCCGTGGGCG CGTTAATCGA TAAACGTATT CCTGAAATCA TCATGACAGT CCTAGGAGTG
TTATTGATGG GCGTGCTGGT GGCTTTTTGG ATGGGGCGGC AAGTGCGGGA AATGTTGTTC
GGCTTGCAAC CTGCTGAAAT TGGCCGTTTA TTCGTCGAGC AAGACGCGAT TCTTAACACA
GTGCGAATGG GTGTGGTGGC ATTGGATGCC GATGGTCGTA TCCGCAAGTT GAATCAAAGG
GCGCGGGAGA TCTTAGCCTT ATCTCCGACC TGCCAACCTA ATGATCTAAT GTTGAGTGAT
TTATTGCCGC AGCACGCCGA TTTTCTACTG ACGAATCAAA ACAAAACCAT CAGGGGATTC
GAGTTATTTG CCAATGAGCA ATGGCTGGTG ATGTCGCGGG TGCCGTTTCA GGTGCGGGAT
CAAAATGATG GCTTGCTGCT GACGATGCGC CCCGCCGATG AAATTGAGCG CTTGAGCCAA
CAACTGGCCA AAGTGCAAGA GTTTGCCGAA ATGCTCAGAG TGCAAACCCA TGATTACTCG
AATAAACTCC ATACTCTAGG CGCCTTGTTG CAACTTAAAG CCTACGACAA AGCGGTCGAA
TTTATCGGCC AAGAAAGCCA AGGTTGGCAG GCTCAAATCC ATTTATTACT GTCGCAAATC
CATGAGCCGA CGATAGCCGG ATTACTCTTG GGTAAGTATC ACAAGGCGAA AGAGCTCAAT
ATTGAGTTTC AAATCAGCCC AGACAGTCAA CTCAGCGATG TTCAAGACGC CATTATGCTT
GAGCGGATGG TGTCGATTAT GGGCAACCTT ATCGATAATG CCATTGAGGC TGTGCACAGG
GCGAACAATC ATAAGCCCCG CCGCGTGGTC GTAACTTTAG ATGAAACCGC CTCTAACCTG
ATTTTTGATG TGGAAGACAG TGGCGATGGG ATTTCTAAAA CCGAGTACAG TACGATATTC
GATCCAGATT ACAGCTCTAA GCAGGGGGCG CAGCACGGTG TGGGCATGTA TATCGTTAAT
ACTTACCTGT GTGCCTGCCA TGGCAGCTTA GAGTTTGCCG ACTCAGATTT AGGTGGAGCG
CGTTTTTCTG TGTATATTCC CACTAAACCT TTACCTGAAG TAGGTACCGT TTAA
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| Protein sequence | MRRPKRLETW LISGVTCLSL LLCALFGGIS YQILSRSITE QSGAKALGLA HAVATRADVI
TALQTGHSSP KLLAAIEGIR LASKADFIVV GDTHKYRIVH PDSDKIGKKM EGGDSQAALE
GESYISEAQG SLGRSIRGKV PVLDEQGEII GLVSVGFLSQ SVGALIDKRI PEIIMTVLGV
LLMGVLVAFW MGRQVREMLF GLQPAEIGRL FVEQDAILNT VRMGVVALDA DGRIRKLNQR
AREILALSPT CQPNDLMLSD LLPQHADFLL TNQNKTIRGF ELFANEQWLV MSRVPFQVRD
QNDGLLLTMR PADEIERLSQ QLAKVQEFAE MLRVQTHDYS NKLHTLGALL QLKAYDKAVE
FIGQESQGWQ AQIHLLLSQI HEPTIAGLLL GKYHKAKELN IEFQISPDSQ LSDVQDAIML
ERMVSIMGNL IDNAIEAVHR ANNHKPRRVV VTLDETASNL IFDVEDSGDG ISKTEYSTIF
DPDYSSKQGA QHGVGMYIVN TYLCACHGSL EFADSDLGGA RFSVYIPTKP LPEVGTV
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