Gene Shewmr4_3092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3092 
Symbol 
ID4253663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3700483 
End bp3701310 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content48% 
IMG OID638119734 
Producthypothetical protein 
Protein accessionYP_735220 
Protein GI113971427 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00006748 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAGCA GATCTCCGTT CGAATCCTTT CAGTGGAAAA GCGATATTTT TAACTGTGAA 
AGCACTGATA TCGATAATTT TTATCTACAG CTTGAGCAGG AAATGTCCCG TTTGGGGATG
GTTGAGAAAA AACTCGGTGA AGTCGGCAAG TACAGCGTCA GTCTGTATCA ATCTCCCGCC
GCCAAATCTG GCTTACCTTC GTTATTGATC AGCGCAGGGT TTCACGGTGA AGAATCGGCA
GGCCCTTGGG GCTTACTGCA CTTTTTAAGT GAAGCATCGG TCGATTTATT CGAACGGGTG
AATTTGAGCA TTCTGCCTCT GGTGAACCCA ACAGGCTTTA AGCGTGGCCA TAGATTTAAT
AAGTTTGGCG AAAACCCAAA CCGTGGCTTC GTGTTCGAAA ACGGTAAACC TAAGGCCAAC
GAGAGCACCT CGGTGGAAGG TAAACTGCTG TTAGAACACG CACAATTACT CATTGGAGCG
AGCCGTGACG GTATTTTAAC CTGCCATGAG GATGTGCTGA GCCGTGATGC TTATGTGTAT
TCTTTCGAAC CAAGCCAAGT GCCGGGACGT TTTAGTCTCG ATTTACGCGA TACCTTAGGG
GGTTATTTCC CTATCGCGGC CGATGGTGAT ATTGATGGTT GCCCGGTTAA AGATGGCCTC
ATTTTCAACC ACTTCGATAC CTCATTTGAG GCGTGTTTAG TGCGTAGCGG CGCGCGTGTC
GGTGCCTGTA CTGAAACGCC AGCACTGCAA AACTTCGACC AACGCGTCTT GGCAAATAGC
GCGGCAATGA CCCATTTCTT GGCCCTTTGC GCACCATTAT GCGATTGA
 
Protein sequence
MVSRSPFESF QWKSDIFNCE STDIDNFYLQ LEQEMSRLGM VEKKLGEVGK YSVSLYQSPA 
AKSGLPSLLI SAGFHGEESA GPWGLLHFLS EASVDLFERV NLSILPLVNP TGFKRGHRFN
KFGENPNRGF VFENGKPKAN ESTSVEGKLL LEHAQLLIGA SRDGILTCHE DVLSRDAYVY
SFEPSQVPGR FSLDLRDTLG GYFPIAADGD IDGCPVKDGL IFNHFDTSFE ACLVRSGARV
GACTETPALQ NFDQRVLANS AAMTHFLALC APLCD