Gene Shewmr4_3091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3091 
Symbol 
ID4253662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3699471 
End bp3700385 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content49% 
IMG OID638119733 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_735219 
Protein GI113971426 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000280887 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATGC TTCGCACCAC AGCTTTATTA TTGACTCTGG TTTTTCCGAG TCTTTCCGCT 
TTAGCAACGG AATACCCTTT ACCGTCTTCG AAGAGTCGGT TAGTTGGCGA GAACCTGTAT
TACACAGTGC CAGAGGGTAA ACACACCCTC GAAGATATTG CCGCTAAATT CCAACTCGGT
CTAAGCAACT TGCTGGAAGC AAACCCTGGC GTGGATCCTT TCCTACCAAC ACCAGGCAGC
AAGCTATTAA TTCCTCAACA GCTCATTCTG CCAAATGCGC CGCGTGAAGG CATTGTCATC
AACGTCGCCG AAATGCGCCT GTATTACTAT CCAAAAGGTA AGAACACCGT TGAAGTGCTG
CCAATCGGTA TTGGTCAGAT TGGTAAAGAT ACCCCTGAAA ACTGGGTCAC CAGTGTTCAA
CGTAAACGCG CTAACCCAAC TTGGACACCG ACACCACGTA TTCGTAAAGA ATATGCGGCA
AGGGGCGAAA TTCTGCCTGC GGTATGGCCA GCGGGTCCCG ATAACCCAAT GGGACTCTAC
GCGCTCTACA TTGGTAACTT GTATGCCATC CATGGTACCA ACGCCAGCTT CGGTATTGGT
TTACGTGTCA GCCAAGGCTG CGTGCGTTTA CGCCACGATG ACATTGAACA CTTATTCAAA
ACGGTTCCAG TGGGTACCCG AGTACAATTT GTGAACCAAC CGATTAAAGC GACCGAAGAA
CCAGATGGTA AGCGCTACTT AGCCGTGCAC CAGCCACTGT CGCGCACCAT TGCCGAGTTT
GAATCAGCAG AGCCAGTCTC TCTGACCTTA CCGAAAGACA TCGCCAAGTT TATTGCCAAG
GCCGATACCG ATTCAGCAGT GATTAAAAAA CTGCTCGATG AGCGTACAGG CGTACCAACG
ATTATTAATC AGTAA
 
Protein sequence
MSMLRTTALL LTLVFPSLSA LATEYPLPSS KSRLVGENLY YTVPEGKHTL EDIAAKFQLG 
LSNLLEANPG VDPFLPTPGS KLLIPQQLIL PNAPREGIVI NVAEMRLYYY PKGKNTVEVL
PIGIGQIGKD TPENWVTSVQ RKRANPTWTP TPRIRKEYAA RGEILPAVWP AGPDNPMGLY
ALYIGNLYAI HGTNASFGIG LRVSQGCVRL RHDDIEHLFK TVPVGTRVQF VNQPIKATEE
PDGKRYLAVH QPLSRTIAEF ESAEPVSLTL PKDIAKFIAK ADTDSAVIKK LLDERTGVPT
IINQ