Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3086 |
Symbol | |
ID | 4253657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3690291 |
End bp | 3691721 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638119728 |
Product | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase |
Protein accession | YP_735214 |
Protein GI | 113971421 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain [TIGR02198] rfaE bifunctional protein, domain I [TIGR02199] rfaE bifunctional protein, domain II |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.521766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTTT CTCTGCCAGC ATTTGAAAAA GCCAAAGTGT TAGTTGTCGG CGATGTGATG TTAGATCGCT ACTGGGTTGG GCCGACGGGA CGTATCTCGC CCGAAGCGCC AGTGCCCGTG GTGAAGATTA ACCAAGTCGA AGACAGACCG GGTGGAGCGG CCAACGTAGC GCTAAATATC GCGACCCTAG GCGGCCAAGT ACAATTGGCG GGGTTAGTGG GCGAGGATGA TACCGCTAAG GCGTTAACCC TTGGGGTGCA AGCTCTGGGT GTTGAACCAC AATGGCTAAA AATTGCCGAC AAACCGACCA TTACCAAACT GCGGGTACTG TCGCGTAACC AGCAGCTTAT TCGCCTCGAT TTTGAAGAGT CCTTCGATAA GCAGGATAGT GCGCGTTTAC TTAAACAGTC TGAAGCCTTA CTCGATTCGG TCGATGTGGT GGTATTGTCG GATTATGCGA AGGGTGCTAT CGATAAGCCG CAGGATTTTA TTGCGCTGGC TCGCGCTAAA GGCGTGAAAG TGCTTGTCGA TCCAAAGGGT TCCGATTTTA GCCGTTACCA TGGCGCTTCA CTCATCACAC CCAATATGAG TGAATTTGAA GCCGTGGTTG GCGCGGTAAC CTCTGAGGCG GATCTGCTCG AAAAGGCCCG AGGCTTACTC AATAAACACC AGTTCGACGC TATCTTAGTC ACTCGCTCCG AAAAGGGCAT GACCTTAGTA ACGGCCAATG CCCCTGAGTT ACACATTCCT ACGGTGGCCC GTGAGGTGTA TGACGTAACA GGCGCCGGTG ATACTGTGAT TTCTGCTCTC GCGACGTCAC TCGCGGCGGG CGCTGAACTG CCACAGGCCT GCGCCATTGC AAATACCGCC GCTGGAGTTG TGGTGGGTAA ATTGGGCACT TCAACCGTGT CTCGTATCGA GCTGATTGAA GCCTTAGCTC TGCACCACGG TGAGTCGGGT TTTGGGGTGG TGAGTGAAGA TCAACTTGCC TATGCCCTAG AGCAAGCCAA ATTGCGCGGC GAGCGAGTGG TGATGACCAA CGGTTGCTTC GATATTCTGC ATGCGGGGCA CGTCAGTTAT CTTAAACAAG CTAAAGCCTT AGGTGACAGA TTGATCGTGG CTGTGAATGA TGACGCCTCG GTTAAACGCT TAAAAGGTGA AGGTCGCCCA GTCAATCAGG TGGATAGACG TATGGCGGTG TTAGCGGGAT TAGCCGCCGT CGATTGGGTC GTGCCTTTTA GTGAAGACAC GCCACAGCGG ATCATCGCCA GACTGCTCCC CGATCTCTTA GTGAAAGGCG GCGATTATAA GATTGAAGAT ATTGCCGGCG GCGCGGAAGT AATCGCCGCT GGCGGTCAAG TTCAAGTGCT GGGCTTTGAA GACGGCATAT CAACGACGGC GATTATCCAA AATATCATGG CAAAACAGTG A
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Protein sequence | MKVSLPAFEK AKVLVVGDVM LDRYWVGPTG RISPEAPVPV VKINQVEDRP GGAANVALNI ATLGGQVQLA GLVGEDDTAK ALTLGVQALG VEPQWLKIAD KPTITKLRVL SRNQQLIRLD FEESFDKQDS ARLLKQSEAL LDSVDVVVLS DYAKGAIDKP QDFIALARAK GVKVLVDPKG SDFSRYHGAS LITPNMSEFE AVVGAVTSEA DLLEKARGLL NKHQFDAILV TRSEKGMTLV TANAPELHIP TVAREVYDVT GAGDTVISAL ATSLAAGAEL PQACAIANTA AGVVVGKLGT STVSRIELIE ALALHHGESG FGVVSEDQLA YALEQAKLRG ERVVMTNGCF DILHAGHVSY LKQAKALGDR LIVAVNDDAS VKRLKGEGRP VNQVDRRMAV LAGLAAVDWV VPFSEDTPQR IIARLLPDLL VKGGDYKIED IAGGAEVIAA GGQVQVLGFE DGISTTAIIQ NIMAKQ
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