| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3080 |
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| Symbol | |
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| ID | 4253651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3682947 |
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| End bp | 3684761 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119722 |
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| Product | sulfite reductase (NADPH) alpha subunit |
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| Protein accession | YP_735208 |
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| Protein GI | 113971415 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein) |
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| TIGRFAM ID | [TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.274835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTTAA AAGAACTTTC ATCACTGGCT TCACCCCTGT CGCAACCGCA GGTCGAAAAG
CTGAAACAAC TCACCGCTGA ATTAAATGCC GTGCAACTTG CTTGGGTGAG CGGTTATTTA
GCCGCAACGG CCAATGCGTC GGGCAATCTG GCCCAGCTTG CGCCCGTGTC CGATGCTCAG
GCGGCGCAGA CAGTGACCAT TCTCTATGGC AGCCAAACCG GCAATGGCCG TGGTATTGCC
AAAGCCTTGG CCGAGAAGGC AAAAGCGCAG GGCTATAGTG TGAATCTAGC TTCTATGGGT
GAATACAATG TGCGTCAGCT TAAGCAAGAA ACCTTGTTAT TGCTGGTGGT CAGTACCCAT
GGTGAGGGTG AAGCGCCGGA TGATGCGATT GAATTACATA AGTTTTTAGC ATCGAAACGC
GCACCTCAAT TAAACAACTT ACATTACTCT GTGTTGGCGC TGGGCGATTC AAGCTATGAG
TTTTTCTGCC AGACAGGTAA AGACTTCGAT GCCCGTCTTT CGGCATTAGG CGCCAAAGCG
CTGCTGCCTC TGGTTGAGTG TGATGTGGAC TATGAGGCTG CGGCCGGACA GTGGCACGCC
GATGTACTCT CCGCCGTGAA GCCACTCATT CAAACCACGG CTAACGTGGT GGCGCTCAAT
GATACCAGCT CGGCACTCGC TGCCAGCGAG AGCGAATTTA CTAAGCAAAA CCCTTACAGT
GCAGAAGTGT TGGTGAGCCA GAAGATCACT GGACGTGGTT CAGACCGAGA CGTGCGCCAC
GTTGAAATCG ATTTAGGCGA GTCAGGCTTA CGCTATGAAG TCGGTGATGC CCTTGGAGTA
TGGTTTAGCA ACAATGAAAC TTTGGTTGAT GAGATTTTAG CGGGCTTAGG GTTAGCCGCC
GATACTAAGG TGACTGTCGC TAATGAATCC ATCAGCCTCA AACAAGCCTT AATCGAGAAG
AAAGAGCTGA CACAGTTATA TCCTGGTTTA GTCAAAGCCT GGGCCGAGTT GTCCGCAAGC
CCAGAGCTGC TTGCCCTGAG CGAAGATAAA GAACAGGTTC GCCAGTTTAT CTTACATCAT
CAATTTGCAG ACTTAGTGGC GAACTATCAG CTCAAGGCCG ATGCTAATCT CGATGCAAAC
AAGTTAGTGG AATTATTACG CCCATTAACG CCAAGACTCT ACTCCATCGC CTCGAGCCAG
AGTGAAGTCG ATACCGAAGT GCATCTCACC GTGGCTTTGG TAGAAGATGA GCACCAAGGA
CAAGCCCGTT TTGGCGGTGC ATCGCATTTC TTAGCCTCGG CAGAGGAAGG CGCCGAAGTA
AAAGTGTATG TTGAACCGAA CAAGCATTTC CGTTTACCTG AAGATCCACA AACGCCAGTC
ATCATGATTG GCCCTGGCAC AGGGGTTGCG CCGTTTCGCG CCTTTATGCA GGAACGCGTG
GCACAAGGCG CTGAGGGCGA TAGCTGGTTA TTCTTCGGTA ATCCTCATTT TGAGCAGGAC
TTCCTGTATC AAACCGAGTG GCAACAGTAT CTGAAAAACG GCGATTTAAC CCGTATCGAT
GTGGCATTTT CGCGGGATCA GGCCCATAAA ATTTACGTGC AGCACCGCAT TAAAGAGCAG
GGACAAACCC TGTGGCAATG GCTGCAAAAT GGCGCACATC TCTATATTTG TGGTGATGCC
GAACGTATGG CTAAAGACGT ACACCAAGCC CTATTAGGGG TTGCGGTGGA GTTTGGCGGA
CTGTCGAGCG AGGCGGCGGA AGAATATTTC GAGACCCTGC GCAGTCATAA ACGTTACCAA
AAAGACGTGT ACTAA
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| Protein sequence | MLLKELSSLA SPLSQPQVEK LKQLTAELNA VQLAWVSGYL AATANASGNL AQLAPVSDAQ
AAQTVTILYG SQTGNGRGIA KALAEKAKAQ GYSVNLASMG EYNVRQLKQE TLLLLVVSTH
GEGEAPDDAI ELHKFLASKR APQLNNLHYS VLALGDSSYE FFCQTGKDFD ARLSALGAKA
LLPLVECDVD YEAAAGQWHA DVLSAVKPLI QTTANVVALN DTSSALAASE SEFTKQNPYS
AEVLVSQKIT GRGSDRDVRH VEIDLGESGL RYEVGDALGV WFSNNETLVD EILAGLGLAA
DTKVTVANES ISLKQALIEK KELTQLYPGL VKAWAELSAS PELLALSEDK EQVRQFILHH
QFADLVANYQ LKADANLDAN KLVELLRPLT PRLYSIASSQ SEVDTEVHLT VALVEDEHQG
QARFGGASHF LASAEEGAEV KVYVEPNKHF RLPEDPQTPV IMIGPGTGVA PFRAFMQERV
AQGAEGDSWL FFGNPHFEQD FLYQTEWQQY LKNGDLTRID VAFSRDQAHK IYVQHRIKEQ
GQTLWQWLQN GAHLYICGDA ERMAKDVHQA LLGVAVEFGG LSSEAAEEYF ETLRSHKRYQ
KDVY
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