Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3067 |
Symbol | |
ID | 4253638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3665722 |
End bp | 3666927 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638119709 |
Product | major facilitator transporter |
Protein accession | YP_735195 |
Protein GI | 113971402 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.126361 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACAC CCCAAACCGC CAATCCCAAA GCACTACTGC TGTGGATGAC GTTTGTTATG TCGCTCGTCT TTGCCGTCTG GCAAGCCCTG TTAAATAACT TTGTGATAGA AAAAGCCCAA TTCACTGGCG CCGAAATCGG TATGCTGCAA AGCCTAAGGG AAATCCCCGG CTTCTTGGCC TTTACCGCCA TTTTTGTGTT GCTGTTAGTC CGCGAGCAAG CCTTTGCTTT GCTGTCATTA GCCTTGTTAT GCATAGGTGT AGCAATTACT GGCTTTTTCC CGCAGGTACT GGGTTTATAT CTCACCACAG TCTTGATGTC GGTTGGATTC CATTATTTTG AAACCATTAA CCAATCCCTC ACACTACAAT GGGTCGATAA ACAAGACACT GCAGCATTTA TGGGCAAAGC GCTGGCATGG CGCTCGGCGG CGGCCTTAGT CGGCTATGGC AGTATTTGGA TAATAATGAC CTGGCTAAAA CTAGATTACT GGCATATGTA TTTGATTATT GGTGTATTAG GTTTACTGAT GACGATCAGT ATGAGCCTGT ACTACCCACA GTTTGAAACC CATGAAGTAC AGCATAAAAA AATCATCCTA CGTAAACGCT ACTGGCTGTA TTACCTGTTA ACCTTCTTCT CTGGCGCCCG TCGGCAGATT TTTATGGTAT TCGCTGGCTT TATGATGGTC GAGAAATTCG GCTACAGTGT CAGTGAAATC ACCGCCCTTT TCCTAATCAA CTATGTGGTA AACCTATTAT TTGCTCCTGC AATTGGCCGC TTTATCGGCC GTATTGGCGA ACGAAATGCC CTCACGGTGG AATACATTGG ACTGTTTTTC GTATTTGTCA GTTATGCGCT TGTCGAGCAA CCCCATATGG CCGCCGCCCT CTATGTAATT GACCATTTGC TGTTTGCGAT GGCGATTGCC ATGAAAACCT ACTTTCAAAA GATTGCCGAT AGCAAAGATA TTGCGGCCAC CATGTCGGTC AGTTTTACCA TTAACCATAT CGCGGCTGTG ATTATCCCTG TGCTCTTGGG CTTACTGTGG CTGAGCGATC CCGCCCTTGT CTTCTACATT GGCGCCGGAT TTGCGGTCTG TTCCTTAATA TTAGCCCTCA ATGTACCGCG CCATCCGTCA CCCGGGAATG AAACCAATTG GGCTTGGTCT GCTAAATCCA TAGAAAAACC GAGTCTCGAC AGTTAA
|
Protein sequence | MKTPQTANPK ALLLWMTFVM SLVFAVWQAL LNNFVIEKAQ FTGAEIGMLQ SLREIPGFLA FTAIFVLLLV REQAFALLSL ALLCIGVAIT GFFPQVLGLY LTTVLMSVGF HYFETINQSL TLQWVDKQDT AAFMGKALAW RSAAALVGYG SIWIIMTWLK LDYWHMYLII GVLGLLMTIS MSLYYPQFET HEVQHKKIIL RKRYWLYYLL TFFSGARRQI FMVFAGFMMV EKFGYSVSEI TALFLINYVV NLLFAPAIGR FIGRIGERNA LTVEYIGLFF VFVSYALVEQ PHMAAALYVI DHLLFAMAIA MKTYFQKIAD SKDIAATMSV SFTINHIAAV IIPVLLGLLW LSDPALVFYI GAGFAVCSLI LALNVPRHPS PGNETNWAWS AKSIEKPSLD S
|
| |