Gene Shewmr4_3067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3067 
Symbol 
ID4253638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3665722 
End bp3666927 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content46% 
IMG OID638119709 
Productmajor facilitator transporter 
Protein accessionYP_735195 
Protein GI113971402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.126361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC CCCAAACCGC CAATCCCAAA GCACTACTGC TGTGGATGAC GTTTGTTATG 
TCGCTCGTCT TTGCCGTCTG GCAAGCCCTG TTAAATAACT TTGTGATAGA AAAAGCCCAA
TTCACTGGCG CCGAAATCGG TATGCTGCAA AGCCTAAGGG AAATCCCCGG CTTCTTGGCC
TTTACCGCCA TTTTTGTGTT GCTGTTAGTC CGCGAGCAAG CCTTTGCTTT GCTGTCATTA
GCCTTGTTAT GCATAGGTGT AGCAATTACT GGCTTTTTCC CGCAGGTACT GGGTTTATAT
CTCACCACAG TCTTGATGTC GGTTGGATTC CATTATTTTG AAACCATTAA CCAATCCCTC
ACACTACAAT GGGTCGATAA ACAAGACACT GCAGCATTTA TGGGCAAAGC GCTGGCATGG
CGCTCGGCGG CGGCCTTAGT CGGCTATGGC AGTATTTGGA TAATAATGAC CTGGCTAAAA
CTAGATTACT GGCATATGTA TTTGATTATT GGTGTATTAG GTTTACTGAT GACGATCAGT
ATGAGCCTGT ACTACCCACA GTTTGAAACC CATGAAGTAC AGCATAAAAA AATCATCCTA
CGTAAACGCT ACTGGCTGTA TTACCTGTTA ACCTTCTTCT CTGGCGCCCG TCGGCAGATT
TTTATGGTAT TCGCTGGCTT TATGATGGTC GAGAAATTCG GCTACAGTGT CAGTGAAATC
ACCGCCCTTT TCCTAATCAA CTATGTGGTA AACCTATTAT TTGCTCCTGC AATTGGCCGC
TTTATCGGCC GTATTGGCGA ACGAAATGCC CTCACGGTGG AATACATTGG ACTGTTTTTC
GTATTTGTCA GTTATGCGCT TGTCGAGCAA CCCCATATGG CCGCCGCCCT CTATGTAATT
GACCATTTGC TGTTTGCGAT GGCGATTGCC ATGAAAACCT ACTTTCAAAA GATTGCCGAT
AGCAAAGATA TTGCGGCCAC CATGTCGGTC AGTTTTACCA TTAACCATAT CGCGGCTGTG
ATTATCCCTG TGCTCTTGGG CTTACTGTGG CTGAGCGATC CCGCCCTTGT CTTCTACATT
GGCGCCGGAT TTGCGGTCTG TTCCTTAATA TTAGCCCTCA ATGTACCGCG CCATCCGTCA
CCCGGGAATG AAACCAATTG GGCTTGGTCT GCTAAATCCA TAGAAAAACC GAGTCTCGAC
AGTTAA
 
Protein sequence
MKTPQTANPK ALLLWMTFVM SLVFAVWQAL LNNFVIEKAQ FTGAEIGMLQ SLREIPGFLA 
FTAIFVLLLV REQAFALLSL ALLCIGVAIT GFFPQVLGLY LTTVLMSVGF HYFETINQSL
TLQWVDKQDT AAFMGKALAW RSAAALVGYG SIWIIMTWLK LDYWHMYLII GVLGLLMTIS
MSLYYPQFET HEVQHKKIIL RKRYWLYYLL TFFSGARRQI FMVFAGFMMV EKFGYSVSEI
TALFLINYVV NLLFAPAIGR FIGRIGERNA LTVEYIGLFF VFVSYALVEQ PHMAAALYVI
DHLLFAMAIA MKTYFQKIAD SKDIAATMSV SFTINHIAAV IIPVLLGLLW LSDPALVFYI
GAGFAVCSLI LALNVPRHPS PGNETNWAWS AKSIEKPSLD S